Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNGA1P29973 MIR3180-4-201ENST00000582223 153 ntBASIC20.85■□□□□ 0.93
CNGA1P29973 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.85■□□□□ 0.93
CNGA1P29973 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNGA1P29973 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNGA1P29973 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNGA1P29973 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNGA1P29973 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNGA1P29973 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNGA1P29973 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNGA1P29973 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.84■□□□□ 0.93
CNGA1P29973 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNGA1P29973 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNGA1P29973 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNGA1P29973 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNGA1P29973 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNGA1P29973 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CNGA1P29973 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNGA1P29973 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.84■□□□□ 0.93
CNGA1P29973 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.84■□□□□ 0.93
CNGA1P29973 SLC25A1P1-201ENST00000528351 927 ntBASIC20.84■□□□□ 0.93
CNGA1P29973 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CNGA1P29973 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNGA1P29973 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNGA1P29973 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNGA1P29973 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
CNGA1P29973 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNGA1P29973 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CNGA1P29973 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNGA1P29973 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNGA1P29973 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CNGA1P29973 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CNGA1P29973 AL161938.1-201ENST00000569833 2180 ntBASIC20.83■□□□□ 0.93
CNGA1P29973 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNGA1P29973 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNGA1P29973 KRT8P32-201ENST00000512863 1461 ntBASIC20.83■□□□□ 0.93
CNGA1P29973 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNGA1P29973 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.83■□□□□ 0.93
CNGA1P29973 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNGA1P29973 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNGA1P29973 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CNGA1P29973 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNGA1P29973 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.83■□□□□ 0.93
CNGA1P29973 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CNGA1P29973 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNGA1P29973 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.83■□□□□ 0.93
CNGA1P29973 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNGA1P29973 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.83■□□□□ 0.92
CNGA1P29973 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CNGA1P29973 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CNGA1P29973 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.83■□□□□ 0.92
CNGA1P29973 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.83■□□□□ 0.92
CNGA1P29973 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNGA1P29973 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNGA1P29973 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNGA1P29973 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.82■□□□□ 0.92
CNGA1P29973 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNGA1P29973 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNGA1P29973 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNGA1P29973 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.82■□□□□ 0.92
CNGA1P29973 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.82■□□□□ 0.92
CNGA1P29973 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNGA1P29973 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
CNGA1P29973 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNGA1P29973 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.82■□□□□ 0.92
CNGA1P29973 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNGA1P29973 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNGA1P29973 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.82■□□□□ 0.92
CNGA1P29973 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.82■□□□□ 0.92
CNGA1P29973 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.82■□□□□ 0.92
CNGA1P29973 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNGA1P29973 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNGA1P29973 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.82■□□□□ 0.92
CNGA1P29973 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.82■□□□□ 0.92
CNGA1P29973 RNA5SP419-201ENST00000515908 135 ntBASIC20.82■□□□□ 0.92
CNGA1P29973 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.82■□□□□ 0.92
CNGA1P29973 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.82■□□□□ 0.92
CNGA1P29973 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.82■□□□□ 0.92
CNGA1P29973 AC092865.5-201ENST00000545435 363 ntBASIC20.82■□□□□ 0.92
CNGA1P29973 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.82■□□□□ 0.92
CNGA1P29973 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.82■□□□□ 0.92
CNGA1P29973 AL591684.3-201ENST00000605187 298 ntBASIC20.82■□□□□ 0.92
CNGA1P29973 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.82■□□□□ 0.92
CNGA1P29973 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
CNGA1P29973 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.82■□□□□ 0.92
CNGA1P29973 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.82■□□□□ 0.92
CNGA1P29973 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNGA1P29973 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNGA1P29973 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNGA1P29973 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNGA1P29973 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNGA1P29973 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CNGA1P29973 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNGA1P29973 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNGA1P29973 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNGA1P29973 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.81■□□□□ 0.92
CNGA1P29973 AL031284.1-201ENST00000419297 478 ntBASIC20.81■□□□□ 0.92
CNGA1P29973 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.81■□□□□ 0.92
CNGA1P29973 AF186996.4-201ENST00000467186 377 ntBASIC20.81■□□□□ 0.92
CNGA1P29973 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms