Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HTR1EP28566 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.6■□□□□ 0.41
HTR1EP28566 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HTR1EP28566 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HTR1EP28566 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
HTR1EP28566 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HTR1EP28566 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.6■□□□□ 0.41
HTR1EP28566 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.6■□□□□ 0.41
HTR1EP28566 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.6■□□□□ 0.41
HTR1EP28566 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HTR1EP28566 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HTR1EP28566 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HTR1EP28566 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.59■□□□□ 0.41
HTR1EP28566 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTR1EP28566 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTR1EP28566 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.59■□□□□ 0.41
HTR1EP28566 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTR1EP28566 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HTR1EP28566 AC138932.1-201ENST00000534164 6830 ntBASIC17.59■□□□□ 0.41
HTR1EP28566 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTR1EP28566 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.59■□□□□ 0.41
HTR1EP28566 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTR1EP28566 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTR1EP28566 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTR1EP28566 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTR1EP28566 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTR1EP28566 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HTR1EP28566 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.59■□□□□ 0.41
HTR1EP28566 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.59■□□□□ 0.41
HTR1EP28566 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HTR1EP28566 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTR1EP28566 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTR1EP28566 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTR1EP28566 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTR1EP28566 PRORSD1P-202ENST00000563365 2154 ntBASIC17.59■□□□□ 0.41
HTR1EP28566 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HTR1EP28566 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.59■□□□□ 0.41
HTR1EP28566 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HTR1EP28566 AC008556.1-201ENST00000610908 2040 ntBASIC17.59■□□□□ 0.41
HTR1EP28566 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.59■□□□□ 0.41
HTR1EP28566 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.59■□□□□ 0.41
HTR1EP28566 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HTR1EP28566 AL357033.4-201ENST00000617703 1807 ntBASIC17.58■□□□□ 0.41
HTR1EP28566 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.58■□□□□ 0.41
HTR1EP28566 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HTR1EP28566 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
HTR1EP28566 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HTR1EP28566 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.58■□□□□ 0.41
HTR1EP28566 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HTR1EP28566 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HTR1EP28566 AC073508.3-201ENST00000619697 1419 ntBASIC17.58■□□□□ 0.41
HTR1EP28566 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HTR1EP28566 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HTR1EP28566 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HTR1EP28566 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.58■□□□□ 0.4
HTR1EP28566 AC104076.2-201ENST00000448912 469 ntBASIC17.58■□□□□ 0.4
HTR1EP28566 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.58■□□□□ 0.4
HTR1EP28566 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.58■□□□□ 0.4
HTR1EP28566 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.58■□□□□ 0.4
HTR1EP28566 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.58■□□□□ 0.4
HTR1EP28566 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
HTR1EP28566 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.58■□□□□ 0.4
HTR1EP28566 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
HTR1EP28566 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
HTR1EP28566 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
HTR1EP28566 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HTR1EP28566 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HTR1EP28566 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HTR1EP28566 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HTR1EP28566 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTR1EP28566 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HTR1EP28566 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTR1EP28566 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HTR1EP28566 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
HTR1EP28566 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HTR1EP28566 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.57■□□□□ 0.4
HTR1EP28566 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.57■□□□□ 0.4
HTR1EP28566 KRT8P3-201ENST00000519669 1449 ntBASIC17.57■□□□□ 0.4
HTR1EP28566 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTR1EP28566 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTR1EP28566 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTR1EP28566 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTR1EP28566 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HTR1EP28566 LIN28AP1-201ENST00000429574 405 ntBASIC17.57■□□□□ 0.4
HTR1EP28566 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTR1EP28566 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.57■□□□□ 0.4
HTR1EP28566 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.57■□□□□ 0.4
HTR1EP28566 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HTR1EP28566 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.57■□□□□ 0.4
HTR1EP28566 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTR1EP28566 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTR1EP28566 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HTR1EP28566 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HTR1EP28566 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTR1EP28566 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTR1EP28566 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HTR1EP28566 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.56■□□□□ 0.4
HTR1EP28566 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HTR1EP28566 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HTR1EP28566 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms