Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN3P26045 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
PTPN3P26045 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN3P26045 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.72■□□□□ 0.59
PTPN3P26045 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 AC097493.4-201ENST00000641197 219 ntBASIC18.72■□□□□ 0.59
PTPN3P26045 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 PHGDH-209ENST00000641074 1780 ntBASIC18.72■□□□□ 0.59
PTPN3P26045 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN3P26045 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN3P26045 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN3P26045 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN3P26045 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN3P26045 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN3P26045 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN3P26045 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN3P26045 AC018470.1-201ENST00000624790 3129 ntBASIC18.71■□□□□ 0.59
PTPN3P26045 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN3P26045 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN3P26045 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN3P26045 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN3P26045 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN3P26045 AC010203.1-204ENST00000548782 407 ntBASIC18.71■□□□□ 0.59
PTPN3P26045 AC009065.1-201ENST00000564055 1225 ntBASIC18.71■□□□□ 0.59
PTPN3P26045 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN3P26045 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PTPN3P26045 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN3P26045 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN3P26045 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN3P26045 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN3P26045 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN3P26045 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN3P26045 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PTPN3P26045 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
PTPN3P26045 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN3P26045 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN3P26045 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN3P26045 REXO1L9P-201ENST00000604264 2108 ntBASIC18.7■□□□□ 0.58
PTPN3P26045 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN3P26045 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN3P26045 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN3P26045 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN3P26045 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PTPN3P26045 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPN3P26045 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PTPN3P26045 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN3P26045 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PTPN3P26045 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN3P26045 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN3P26045 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PTPN3P26045 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PTPN3P26045 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN3P26045 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN3P26045 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN3P26045 LINC01126-201ENST00000623515 1646 ntBASIC18.7■□□□□ 0.58
PTPN3P26045 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN3P26045 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
PTPN3P26045 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PTPN3P26045 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN3P26045 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PTPN3P26045 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN3P26045 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN3P26045 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN3P26045 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN3P26045 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PTPN3P26045 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN3P26045 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN3P26045 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PTPN3P26045 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN3P26045 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PTPN3P26045 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PTPN3P26045 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN3P26045 AL096828.2-201ENST00000567259 1965 ntBASIC18.69■□□□□ 0.58
PTPN3P26045 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN3P26045 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN3P26045 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN3P26045 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPN3P26045 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PTPN3P26045 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPN3P26045 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN3P26045 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN3P26045 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN3P26045 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN3P26045 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN3P26045 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN3P26045 AL024508.2-201ENST00000607749 1894 ntBASIC18.69■□□□□ 0.58
PTPN3P26045 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PTPN3P26045 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms