Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.21■□□□□ 0.99
ERCC3P19447 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC3P19447 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ERCC3P19447 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.21■□□□□ 0.99
ERCC3P19447 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC3P19447 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.21■□□□□ 0.99
ERCC3P19447 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC3P19447 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC3P19447 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC3P19447 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
ERCC3P19447 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC3P19447 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC3P19447 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC3P19447 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC3P19447 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC3P19447 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC3P19447 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.2■□□□□ 0.98
ERCC3P19447 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.2■□□□□ 0.98
ERCC3P19447 AL592071.1-201ENST00000611956 408 ntBASIC21.2■□□□□ 0.98
ERCC3P19447 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.2■□□□□ 0.98
ERCC3P19447 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.2■□□□□ 0.98
ERCC3P19447 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC3P19447 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.2■□□□□ 0.98
ERCC3P19447 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.2■□□□□ 0.98
ERCC3P19447 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC3P19447 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC3P19447 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC3P19447 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC3P19447 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
ERCC3P19447 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC3P19447 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC3P19447 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.19■□□□□ 0.98
ERCC3P19447 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC3P19447 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.19■□□□□ 0.98
ERCC3P19447 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC3P19447 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC3P19447 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.19■□□□□ 0.98
ERCC3P19447 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.19■□□□□ 0.98
ERCC3P19447 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
ERCC3P19447 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
ERCC3P19447 Z69720.1-201ENST00000601483 472 ntBASIC21.19■□□□□ 0.98
ERCC3P19447 AC099336.1-202ENST00000602961 463 ntBASIC21.19■□□□□ 0.98
ERCC3P19447 AC124864.1-201ENST00000623408 392 ntBASIC21.19■□□□□ 0.98
ERCC3P19447 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC3P19447 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC3P19447 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.19■□□□□ 0.98
ERCC3P19447 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC3P19447 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC3P19447 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.19■□□□□ 0.98
ERCC3P19447 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ERCC3P19447 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC3P19447 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ERCC3P19447 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC3P19447 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC3P19447 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC3P19447 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC3P19447 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ERCC3P19447 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.18■□□□□ 0.98
ERCC3P19447 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC3P19447 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC3P19447 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC3P19447 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.18■□□□□ 0.98
ERCC3P19447 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
ERCC3P19447 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ERCC3P19447 IGHV3-47-201ENST00000425060 335 ntBASIC21.18■□□□□ 0.98
ERCC3P19447 RN7SL606P-201ENST00000472779 293 ntBASIC21.18■□□□□ 0.98
ERCC3P19447 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.18■□□□□ 0.98
ERCC3P19447 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC3P19447 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.18■□□□□ 0.98
ERCC3P19447 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ERCC3P19447 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.18■□□□□ 0.98
ERCC3P19447 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.18■□□□□ 0.98
ERCC3P19447 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.18■□□□□ 0.98
ERCC3P19447 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC3P19447 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC3P19447 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC3P19447 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC3P19447 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC3P19447 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERCC3P19447 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.17■□□□□ 0.98
ERCC3P19447 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC3P19447 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.17■□□□□ 0.98
ERCC3P19447 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.17■□□□□ 0.98
ERCC3P19447 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC3P19447 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC3P19447 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC3P19447 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ERCC3P19447 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC3P19447 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC3P19447 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC3P19447 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC3P19447 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC3P19447 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC3P19447 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.17■□□□□ 0.98
ERCC3P19447 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.17■□□□□ 0.98
ERCC3P19447 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.17■□□□□ 0.98
ERCC3P19447 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.17■□□□□ 0.98
ERCC3P19447 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
ERCC3P19447 GUSBP12-201ENST00000513727 720 ntBASIC21.17■□□□□ 0.98
ERCC3P19447 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms