Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC130P13994 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC130P13994 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC130P13994 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC130P13994 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC130P13994 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC130P13994 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC130P13994 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 AC116407.4-201ENST00000623319 1061 ntBASIC19.41■□□□□ 0.7
CCDC130P13994 AP000550.4-202ENST00000639755 178 ntBASIC19.41■□□□□ 0.7
CCDC130P13994 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC130P13994 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC130P13994 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
CCDC130P13994 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC130P13994 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC130P13994 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC130P13994 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC130P13994 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC130P13994 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC130P13994 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC130P13994 LINC01126-201ENST00000623515 1646 ntBASIC19.4■□□□□ 0.7
CCDC130P13994 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC130P13994 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC130P13994 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC130P13994 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC130P13994 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC130P13994 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC130P13994 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC130P13994 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC130P13994 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC130P13994 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC130P13994 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC130P13994 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC130P13994 RNF126P1-202ENST00000569893 925 ntBASIC19.4■□□□□ 0.7
CCDC130P13994 AC024563.2-201ENST00000603282 481 ntBASIC19.4■□□□□ 0.7
CCDC130P13994 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC130P13994 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC130P13994 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC130P13994 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC130P13994 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCDC130P13994 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC130P13994 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC130P13994 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC130P13994 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC130P13994 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC130P13994 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC130P13994 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC130P13994 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC130P13994 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC130P13994 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC130P13994 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CCDC130P13994 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC130P13994 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
CCDC130P13994 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC130P13994 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC130P13994 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC130P13994 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC130P13994 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC130P13994 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC130P13994 AC091076.1-201ENST00000610741 619 ntBASIC19.39■□□□□ 0.69
CCDC130P13994 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC130P13994 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC130P13994 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC130P13994 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC130P13994 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC130P13994 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC130P13994 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC130P13994 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC130P13994 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC130P13994 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC130P13994 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC130P13994 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC130P13994 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC130P13994 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC130P13994 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC130P13994 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC130P13994 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC130P13994 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC130P13994 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC130P13994 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC130P13994 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC130P13994 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC130P13994 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC130P13994 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms