Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
COL11A2P13942 AC105339.3-201ENST00000560043 636 ntBASIC22.37■■□□□ 1.17
COL11A2P13942 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC22.37■■□□□ 1.17
COL11A2P13942 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC22.37■■□□□ 1.17
COL11A2P13942 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC22.37■■□□□ 1.17
COL11A2P13942 AC083906.6-201ENST00000641366 219 ntBASIC22.37■■□□□ 1.17
COL11A2P13942 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A2P13942 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A2P13942 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A2P13942 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A2P13942 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A2P13942 LINC01126-201ENST00000623515 1646 ntBASIC22.36■■□□□ 1.17
COL11A2P13942 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A2P13942 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A2P13942 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A2P13942 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A2P13942 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.36■■□□□ 1.17
COL11A2P13942 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A2P13942 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC22.36■■□□□ 1.17
COL11A2P13942 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A2P13942 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A2P13942 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A2P13942 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A2P13942 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A2P13942 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A2P13942 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
COL11A2P13942 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COL11A2P13942 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.35■■□□□ 1.17
COL11A2P13942 AL049812.1-201ENST00000432563 2267 ntBASIC22.35■■□□□ 1.17
COL11A2P13942 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
COL11A2P13942 INIP-202ENST00000374236 874 ntTSL 2 BASIC22.35■■□□□ 1.17
COL11A2P13942 AC073621.1-201ENST00000392730 636 ntBASIC22.35■■□□□ 1.17
COL11A2P13942 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.35■■□□□ 1.17
COL11A2P13942 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL11A2P13942 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC22.35■■□□□ 1.17
COL11A2P13942 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.35■■□□□ 1.17
COL11A2P13942 COX5A-204ENST00000567270 579 ntTSL 3 BASIC22.35■■□□□ 1.17
COL11A2P13942 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC22.35■■□□□ 1.17
COL11A2P13942 LINC02084-201ENST00000606069 1096 ntBASIC22.35■■□□□ 1.17
COL11A2P13942 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
COL11A2P13942 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC22.35■■□□□ 1.17
COL11A2P13942 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL11A2P13942 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC22.35■■□□□ 1.17
COL11A2P13942 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
COL11A2P13942 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
COL11A2P13942 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22.34■■□□□ 1.17
COL11A2P13942 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
COL11A2P13942 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC22.34■■□□□ 1.17
COL11A2P13942 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL11A2P13942 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
COL11A2P13942 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC22.34■■□□□ 1.17
COL11A2P13942 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL11A2P13942 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL11A2P13942 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC22.34■■□□□ 1.17
COL11A2P13942 KRT18P65-201ENST00000439811 1286 ntBASIC22.34■■□□□ 1.17
COL11A2P13942 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.34■■□□□ 1.17
COL11A2P13942 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC22.34■■□□□ 1.17
COL11A2P13942 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC22.34■■□□□ 1.17
COL11A2P13942 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC22.34■■□□□ 1.17
COL11A2P13942 AL161938.1-201ENST00000569833 2180 ntBASIC22.34■■□□□ 1.17
COL11A2P13942 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL11A2P13942 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
COL11A2P13942 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COL11A2P13942 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL11A2P13942 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL11A2P13942 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COL11A2P13942 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL11A2P13942 AC007967.3-201ENST00000434308 558 ntBASIC22.33■■□□□ 1.17
COL11A2P13942 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC22.33■■□□□ 1.17
COL11A2P13942 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
COL11A2P13942 AC108751.1-201ENST00000490852 363 ntBASIC22.33■■□□□ 1.17
COL11A2P13942 AC112698.1-201ENST00000510299 916 ntBASIC22.33■■□□□ 1.17
COL11A2P13942 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC22.33■■□□□ 1.17
COL11A2P13942 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.33■■□□□ 1.16
COL11A2P13942 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
COL11A2P13942 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL11A2P13942 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.33■■□□□ 1.16
COL11A2P13942 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.33■■□□□ 1.16
COL11A2P13942 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC22.33■■□□□ 1.16
COL11A2P13942 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
COL11A2P13942 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL11A2P13942 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.16
COL11A2P13942 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.16
COL11A2P13942 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.16
COL11A2P13942 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL11A2P13942 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.32■■□□□ 1.16
COL11A2P13942 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
COL11A2P13942 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC22.32■■□□□ 1.16
COL11A2P13942 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL11A2P13942 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL11A2P13942 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL11A2P13942 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC22.32■■□□□ 1.16
COL11A2P13942 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC22.32■■□□□ 1.16
COL11A2P13942 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
COL11A2P13942 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL11A2P13942 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL11A2P13942 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL11A2P13942 AL499627.1-201ENST00000569373 2188 ntBASIC22.32■■□□□ 1.16
COL11A2P13942 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL11A2P13942 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms