Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.06■□□□□ 0.8
CLTAP09496 HLA-F-220ENST00000434407 884 ntBASIC20.06■□□□□ 0.8
CLTAP09496 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 MYLKP1-201ENST00000509077 1580 ntBASIC20.06■□□□□ 0.8
CLTAP09496 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.06■□□□□ 0.8
CLTAP09496 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.06■□□□□ 0.8
CLTAP09496 AL136038.3-201ENST00000561909 1096 ntBASIC20.06■□□□□ 0.8
CLTAP09496 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 AL136038.4-201ENST00000603606 1261 ntBASIC20.06■□□□□ 0.8
CLTAP09496 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLTAP09496 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 AL391807.1-203ENST00000604392 2365 ntBASIC20.06■□□□□ 0.8
CLTAP09496 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.06■□□□□ 0.8
CLTAP09496 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CLTAP09496 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.05■□□□□ 0.8
CLTAP09496 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLTAP09496 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLTAP09496 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
CLTAP09496 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 PVRIG2P-201ENST00000435460 978 ntBASIC20.05■□□□□ 0.8
CLTAP09496 SPDYE13P-201ENST00000445314 798 ntBASIC20.05■□□□□ 0.8
CLTAP09496 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.05■□□□□ 0.8
CLTAP09496 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.05■□□□□ 0.8
CLTAP09496 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CLTAP09496 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLTAP09496 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.04■□□□□ 0.8
CLTAP09496 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.04■□□□□ 0.8
CLTAP09496 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.04■□□□□ 0.8
CLTAP09496 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.04■□□□□ 0.8
CLTAP09496 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.04■□□□□ 0.8
CLTAP09496 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.04■□□□□ 0.8
CLTAP09496 AC091076.1-201ENST00000610741 619 ntBASIC20.04■□□□□ 0.8
CLTAP09496 AL358472.4-201ENST00000633140 710 ntBASIC20.04■□□□□ 0.8
CLTAP09496 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CLTAP09496 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 AL499627.1-201ENST00000569373 2188 ntBASIC20.04■□□□□ 0.8
CLTAP09496 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.04■□□□□ 0.8
CLTAP09496 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLTAP09496 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
CLTAP09496 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLTAP09496 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLTAP09496 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLTAP09496 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLTAP09496 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.03■□□□□ 0.8
CLTAP09496 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLTAP09496 LTB4R2-202ENST00000528054 3092 ntBASIC20.03■□□□□ 0.8
CLTAP09496 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.03■□□□□ 0.8
CLTAP09496 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLTAP09496 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLTAP09496 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLTAP09496 VENTXP5-201ENST00000523979 775 ntBASIC20.03■□□□□ 0.8
CLTAP09496 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.03■□□□□ 0.8
CLTAP09496 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.03■□□□□ 0.8
CLTAP09496 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.03■□□□□ 0.8
CLTAP09496 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.03■□□□□ 0.8
CLTAP09496 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.03■□□□□ 0.8
CLTAP09496 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLTAP09496 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.03■□□□□ 0.8
CLTAP09496 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.03■□□□□ 0.8
CLTAP09496 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLTAP09496 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLTAP09496 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLTAP09496 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.02■□□□□ 0.8
CLTAP09496 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms