Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.55□□□□□ -0.08
IFNA1P01562 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
IFNA1P01562 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
IFNA1P01562 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.54□□□□□ -0.08
IFNA1P01562 AC007322.4-201ENST00000509611 723 ntBASIC14.54□□□□□ -0.08
IFNA1P01562 RARRES2P4-201ENST00000514074 484 ntBASIC14.54□□□□□ -0.08
IFNA1P01562 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.54□□□□□ -0.08
IFNA1P01562 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.54□□□□□ -0.08
IFNA1P01562 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
IFNA1P01562 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
IFNA1P01562 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
IFNA1P01562 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.54□□□□□ -0.08
IFNA1P01562 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
IFNA1P01562 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
IFNA1P01562 AL499627.1-201ENST00000569373 2188 ntBASIC14.54□□□□□ -0.08
IFNA1P01562 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.54□□□□□ -0.08
IFNA1P01562 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
IFNA1P01562 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IFNA1P01562 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
IFNA1P01562 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.53□□□□□ -0.08
IFNA1P01562 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.53□□□□□ -0.08
IFNA1P01562 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.53□□□□□ -0.08
IFNA1P01562 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
IFNA1P01562 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
IFNA1P01562 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.53□□□□□ -0.08
IFNA1P01562 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.53□□□□□ -0.08
IFNA1P01562 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
IFNA1P01562 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
IFNA1P01562 KRT19P1-201ENST00000405746 1186 ntBASIC14.53□□□□□ -0.08
IFNA1P01562 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
IFNA1P01562 AC027612.3-201ENST00000413684 1047 ntBASIC14.53□□□□□ -0.08
IFNA1P01562 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
IFNA1P01562 YBX1P10-201ENST00000444752 975 ntBASIC14.53□□□□□ -0.08
IFNA1P01562 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.53□□□□□ -0.08
IFNA1P01562 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.53□□□□□ -0.08
IFNA1P01562 AL589743.5-201ENST00000616611 1050 ntBASIC14.53□□□□□ -0.08
IFNA1P01562 AC010536.3-201ENST00000620306 533 ntBASIC14.53□□□□□ -0.08
IFNA1P01562 AC013268.1-206ENST00000638368 961 ntBASIC14.53□□□□□ -0.08
IFNA1P01562 AC112229.1-201ENST00000639295 961 ntBASIC14.53□□□□□ -0.08
IFNA1P01562 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
IFNA1P01562 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
IFNA1P01562 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
IFNA1P01562 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.53□□□□□ -0.08
IFNA1P01562 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
IFNA1P01562 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IFNA1P01562 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.53□□□□□ -0.08
IFNA1P01562 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
IFNA1P01562 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
IFNA1P01562 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
IFNA1P01562 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IFNA1P01562 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IFNA1P01562 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
IFNA1P01562 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
IFNA1P01562 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
IFNA1P01562 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.52□□□□□ -0.08
IFNA1P01562 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
IFNA1P01562 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
IFNA1P01562 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
IFNA1P01562 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
IFNA1P01562 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IFNA1P01562 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
IFNA1P01562 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
IFNA1P01562 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IFNA1P01562 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.52□□□□□ -0.08
IFNA1P01562 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms