Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
GGPS1O95749 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.58■□□□□ 0.89
GGPS1O95749 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.58■□□□□ 0.89
GGPS1O95749 Z69720.1-201ENST00000601483 472 ntBASIC20.58■□□□□ 0.89
GGPS1O95749 AL121772.3-201ENST00000610840 674 ntBASIC20.58■□□□□ 0.89
GGPS1O95749 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
GGPS1O95749 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.58■□□□□ 0.89
GGPS1O95749 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.58■□□□□ 0.89
GGPS1O95749 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.58■□□□□ 0.89
GGPS1O95749 AC004408.2-201ENST00000623613 2777 ntBASIC20.58■□□□□ 0.88
GGPS1O95749 AC112777.1-201ENST00000540175 1423 ntBASIC20.58■□□□□ 0.88
GGPS1O95749 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GGPS1O95749 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GGPS1O95749 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GGPS1O95749 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
GGPS1O95749 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.58■□□□□ 0.88
GGPS1O95749 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
GGPS1O95749 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.58■□□□□ 0.88
GGPS1O95749 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GGPS1O95749 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GGPS1O95749 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GGPS1O95749 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
GGPS1O95749 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GGPS1O95749 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GGPS1O95749 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GGPS1O95749 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GGPS1O95749 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.57■□□□□ 0.88
GGPS1O95749 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
GGPS1O95749 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.57■□□□□ 0.88
GGPS1O95749 KRT17P6-201ENST00000453795 1220 ntBASIC20.57■□□□□ 0.88
GGPS1O95749 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GGPS1O95749 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
GGPS1O95749 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
GGPS1O95749 AC091304.2-201ENST00000564639 760 ntBASIC20.57■□□□□ 0.88
GGPS1O95749 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.57■□□□□ 0.88
GGPS1O95749 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GGPS1O95749 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.57■□□□□ 0.88
GGPS1O95749 AC138894.3-201ENST00000603787 634 ntBASIC20.57■□□□□ 0.88
GGPS1O95749 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.57■□□□□ 0.88
GGPS1O95749 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GGPS1O95749 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GGPS1O95749 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GGPS1O95749 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.57■□□□□ 0.88
GGPS1O95749 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GGPS1O95749 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.57■□□□□ 0.88
GGPS1O95749 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GGPS1O95749 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GGPS1O95749 SDHAP2-201ENST00000455183 2001 ntBASIC20.56■□□□□ 0.88
GGPS1O95749 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.56■□□□□ 0.88
GGPS1O95749 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
GGPS1O95749 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.56■□□□□ 0.88
GGPS1O95749 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GGPS1O95749 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
GGPS1O95749 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GGPS1O95749 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GGPS1O95749 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GGPS1O95749 AC246785.2-201ENST00000432512 513 ntBASIC20.56■□□□□ 0.88
GGPS1O95749 KRT18P31-201ENST00000506277 1292 ntBASIC20.56■□□□□ 0.88
GGPS1O95749 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GGPS1O95749 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
GGPS1O95749 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GGPS1O95749 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.56■□□□□ 0.88
GGPS1O95749 AC099336.1-202ENST00000602961 463 ntBASIC20.56■□□□□ 0.88
GGPS1O95749 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GGPS1O95749 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
GGPS1O95749 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GGPS1O95749 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GGPS1O95749 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GGPS1O95749 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GGPS1O95749 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GGPS1O95749 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.56■□□□□ 0.88
GGPS1O95749 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.56■□□□□ 0.88
GGPS1O95749 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.55■□□□□ 0.88
GGPS1O95749 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
GGPS1O95749 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
GGPS1O95749 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
GGPS1O95749 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GGPS1O95749 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.55■□□□□ 0.88
GGPS1O95749 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GGPS1O95749 IGHV3-47-201ENST00000425060 335 ntBASIC20.55■□□□□ 0.88
GGPS1O95749 AC091607.1-201ENST00000490318 1060 ntBASIC20.55■□□□□ 0.88
GGPS1O95749 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.55■□□□□ 0.88
GGPS1O95749 AP005901.3-202ENST00000581653 237 ntBASIC20.55■□□□□ 0.88
GGPS1O95749 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GGPS1O95749 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GGPS1O95749 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.55■□□□□ 0.88
GGPS1O95749 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GGPS1O95749 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GGPS1O95749 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
GGPS1O95749 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GGPS1O95749 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GGPS1O95749 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GGPS1O95749 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GGPS1O95749 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.54■□□□□ 0.88
GGPS1O95749 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
GGPS1O95749 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.54■□□□□ 0.88
GGPS1O95749 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GGPS1O95749 EMBP1-201ENST00000458200 901 ntBASIC20.54■□□□□ 0.88
GGPS1O95749 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.54■□□□□ 0.88
GGPS1O95749 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms