Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.59■□□□□ 0.57
USP1O94782 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.59■□□□□ 0.57
USP1O94782 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.59■□□□□ 0.57
USP1O94782 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP1O94782 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.59■□□□□ 0.57
USP1O94782 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP1O94782 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP1O94782 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
USP1O94782 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
USP1O94782 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
USP1O94782 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP1O94782 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
USP1O94782 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP1O94782 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.58■□□□□ 0.57
USP1O94782 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP1O94782 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
USP1O94782 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP1O94782 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP1O94782 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
USP1O94782 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.58■□□□□ 0.56
USP1O94782 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
USP1O94782 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP1O94782 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP1O94782 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
USP1O94782 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
USP1O94782 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP1O94782 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.57■□□□□ 0.56
USP1O94782 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP1O94782 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP1O94782 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP1O94782 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP1O94782 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
USP1O94782 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
USP1O94782 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
USP1O94782 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP1O94782 TSPY7P-201ENST00000431358 1114 ntBASIC18.57■□□□□ 0.56
USP1O94782 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP1O94782 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP1O94782 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP1O94782 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP1O94782 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP1O94782 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP1O94782 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
USP1O94782 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP1O94782 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.57■□□□□ 0.56
USP1O94782 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
USP1O94782 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.57■□□□□ 0.56
USP1O94782 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
USP1O94782 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP1O94782 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP1O94782 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP1O94782 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.56■□□□□ 0.56
USP1O94782 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.56■□□□□ 0.56
USP1O94782 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
USP1O94782 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP1O94782 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP1O94782 UNC93B2-201ENST00000285383 730 ntBASIC18.56■□□□□ 0.56
USP1O94782 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP1O94782 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP1O94782 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP1O94782 SLC25A1P2-201ENST00000430693 912 ntBASIC18.56■□□□□ 0.56
USP1O94782 SNORA78-201ENST00000459373 127 ntBASIC18.56■□□□□ 0.56
USP1O94782 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.56■□□□□ 0.56
USP1O94782 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.56■□□□□ 0.56
USP1O94782 MIR4785-201ENST00000585005 73 ntBASIC18.56■□□□□ 0.56
USP1O94782 AL023803.3-201ENST00000615559 522 ntBASIC18.56■□□□□ 0.56
USP1O94782 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP1O94782 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP1O94782 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.56■□□□□ 0.56
USP1O94782 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP1O94782 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP1O94782 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP1O94782 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP1O94782 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.56■□□□□ 0.56
USP1O94782 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.56■□□□□ 0.56
USP1O94782 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.56■□□□□ 0.56
USP1O94782 AC008764.6-201ENST00000595909 2069 ntBASIC18.56■□□□□ 0.56
USP1O94782 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP1O94782 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP1O94782 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP1O94782 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP1O94782 AC036111.1-201ENST00000533973 1582 ntBASIC18.55■□□□□ 0.56
USP1O94782 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP1O94782 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP1O94782 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP1O94782 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP1O94782 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP1O94782 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP1O94782 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.55■□□□□ 0.56
USP1O94782 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP1O94782 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP1O94782 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.55■□□□□ 0.56
USP1O94782 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP1O94782 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.55■□□□□ 0.56
USP1O94782 AL353719.1-201ENST00000566847 864 ntBASIC18.55■□□□□ 0.56
USP1O94782 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.55■□□□□ 0.56
USP1O94782 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.55■□□□□ 0.56
USP1O94782 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.55■□□□□ 0.56
USP1O94782 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.55■□□□□ 0.56
USP1O94782 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms