Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.01■□□□□ 0.15
UPK1BO75841 TSPY21P-201ENST00000433481 731 ntBASIC16.01■□□□□ 0.15
UPK1BO75841 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.01■□□□□ 0.15
UPK1BO75841 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.01■□□□□ 0.15
UPK1BO75841 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
UPK1BO75841 AL591742.1-201ENST00000604433 565 ntBASIC16.01■□□□□ 0.15
UPK1BO75841 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.01■□□□□ 0.15
UPK1BO75841 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.01■□□□□ 0.15
UPK1BO75841 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.01■□□□□ 0.15
UPK1BO75841 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.01■□□□□ 0.15
UPK1BO75841 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
UPK1BO75841 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
UPK1BO75841 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
UPK1BO75841 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
UPK1BO75841 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.01■□□□□ 0.15
UPK1BO75841 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1BO75841 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
UPK1BO75841 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
UPK1BO75841 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.01■□□□□ 0.15
UPK1BO75841 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
UPK1BO75841 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16■□□□□ 0.15
UPK1BO75841 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16■□□□□ 0.15
UPK1BO75841 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16■□□□□ 0.15
UPK1BO75841 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16■□□□□ 0.15
UPK1BO75841 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16■□□□□ 0.15
UPK1BO75841 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
UPK1BO75841 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 AC026691.1-201ENST00000602502 2017 ntBASIC16■□□□□ 0.15
UPK1BO75841 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16■□□□□ 0.15
UPK1BO75841 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 AL603756.1-201ENST00000606511 2163 ntBASIC16■□□□□ 0.15
UPK1BO75841 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
UPK1BO75841 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1BO75841 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
UPK1BO75841 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.99■□□□□ 0.15
UPK1BO75841 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.99■□□□□ 0.15
UPK1BO75841 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.99■□□□□ 0.15
UPK1BO75841 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.99■□□□□ 0.15
UPK1BO75841 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
UPK1BO75841 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.99■□□□□ 0.15
UPK1BO75841 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.99■□□□□ 0.15
UPK1BO75841 AL354811.1-201ENST00000610286 706 ntBASIC15.99■□□□□ 0.15
UPK1BO75841 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.99■□□□□ 0.15
UPK1BO75841 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
UPK1BO75841 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
UPK1BO75841 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
UPK1BO75841 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.99■□□□□ 0.15
UPK1BO75841 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.99■□□□□ 0.15
UPK1BO75841 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.99■□□□□ 0.15
UPK1BO75841 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.99■□□□□ 0.15
UPK1BO75841 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.99■□□□□ 0.15
UPK1BO75841 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.99■□□□□ 0.15
UPK1BO75841 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1BO75841 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.99■□□□□ 0.15
UPK1BO75841 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms