Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.61■□□□□ 0.41
CPNE3O75131 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE3O75131 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE3O75131 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CPNE3O75131 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
CPNE3O75131 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CPNE3O75131 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CPNE3O75131 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE3O75131 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE3O75131 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE3O75131 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.61■□□□□ 0.41
CPNE3O75131 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE3O75131 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CPNE3O75131 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CPNE3O75131 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE3O75131 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE3O75131 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE3O75131 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CPNE3O75131 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CPNE3O75131 TSSC2-201ENST00000450217 709 ntBASIC17.6■□□□□ 0.41
CPNE3O75131 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.6■□□□□ 0.41
CPNE3O75131 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.6■□□□□ 0.41
CPNE3O75131 MIR3180-4-201ENST00000582223 153 ntBASIC17.6■□□□□ 0.41
CPNE3O75131 CLEC4GP1-201ENST00000596555 870 ntBASIC17.6■□□□□ 0.41
CPNE3O75131 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.6■□□□□ 0.41
CPNE3O75131 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.6■□□□□ 0.41
CPNE3O75131 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.6■□□□□ 0.41
CPNE3O75131 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CPNE3O75131 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.6■□□□□ 0.41
CPNE3O75131 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE3O75131 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.6■□□□□ 0.41
CPNE3O75131 AC093525.10-201ENST00000625130 1569 ntBASIC17.6■□□□□ 0.41
CPNE3O75131 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE3O75131 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE3O75131 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.6■□□□□ 0.41
CPNE3O75131 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE3O75131 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE3O75131 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
CPNE3O75131 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE3O75131 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CPNE3O75131 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE3O75131 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.6■□□□□ 0.41
CPNE3O75131 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CPNE3O75131 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CPNE3O75131 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CPNE3O75131 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
CPNE3O75131 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CPNE3O75131 AL032819.2-201ENST00000624543 2162 ntBASIC17.59■□□□□ 0.41
CPNE3O75131 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CPNE3O75131 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CPNE3O75131 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE3O75131 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CPNE3O75131 DUSP5P1-201ENST00000441325 1139 ntBASIC17.59■□□□□ 0.41
CPNE3O75131 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.59■□□□□ 0.41
CPNE3O75131 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
CPNE3O75131 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.59■□□□□ 0.41
CPNE3O75131 NPAP1P7-201ENST00000613027 823 ntBASIC17.59■□□□□ 0.41
CPNE3O75131 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE3O75131 AC068587.9-201ENST00000641814 219 ntBASIC17.59■□□□□ 0.41
CPNE3O75131 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CPNE3O75131 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CPNE3O75131 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CPNE3O75131 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 AC006333.2-201ENST00000607957 2099 ntBASIC17.59■□□□□ 0.41
CPNE3O75131 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE3O75131 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE3O75131 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.58■□□□□ 0.41
CPNE3O75131 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE3O75131 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE3O75131 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE3O75131 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE3O75131 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.58■□□□□ 0.41
CPNE3O75131 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE3O75131 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
CPNE3O75131 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE3O75131 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE3O75131 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE3O75131 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE3O75131 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE3O75131 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE3O75131 MIR662-201ENST00000384847 95 ntBASIC17.58■□□□□ 0.4
CPNE3O75131 AC009065.1-201ENST00000564055 1225 ntBASIC17.58■□□□□ 0.4
CPNE3O75131 AC092119.3-201ENST00000612618 583 ntBASIC17.58■□□□□ 0.4
CPNE3O75131 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms