Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCN1O60741 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
HCN1O60741 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HCN1O60741 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCN1O60741 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCN1O60741 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HCN1O60741 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCN1O60741 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.17■□□□□ 0.34
HCN1O60741 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCN1O60741 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.17■□□□□ 0.34
HCN1O60741 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.17■□□□□ 0.34
HCN1O60741 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HCN1O60741 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.17■□□□□ 0.34
HCN1O60741 AC063952.2-201ENST00000498792 1227 ntBASIC17.17■□□□□ 0.34
HCN1O60741 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HCN1O60741 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.17■□□□□ 0.34
HCN1O60741 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.17■□□□□ 0.34
HCN1O60741 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCN1O60741 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
HCN1O60741 NTF6B-201ENST00000591913 560 ntBASIC17.17■□□□□ 0.34
HCN1O60741 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCN1O60741 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCN1O60741 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCN1O60741 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCN1O60741 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HCN1O60741 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.16■□□□□ 0.34
HCN1O60741 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCN1O60741 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.16■□□□□ 0.34
HCN1O60741 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HCN1O60741 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCN1O60741 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.16■□□□□ 0.34
HCN1O60741 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCN1O60741 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HCN1O60741 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCN1O60741 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCN1O60741 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCN1O60741 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCN1O60741 AP000523.1-201ENST00000398242 1049 ntBASIC17.16■□□□□ 0.34
HCN1O60741 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.16■□□□□ 0.34
HCN1O60741 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HCN1O60741 AC022616.7-201ENST00000525383 220 ntBASIC17.16■□□□□ 0.34
HCN1O60741 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.16■□□□□ 0.34
HCN1O60741 AC139887.4-201ENST00000607877 719 ntBASIC17.16■□□□□ 0.34
HCN1O60741 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HCN1O60741 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCN1O60741 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.16■□□□□ 0.34
HCN1O60741 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.16■□□□□ 0.34
HCN1O60741 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCN1O60741 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.16■□□□□ 0.34
HCN1O60741 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.16■□□□□ 0.34
HCN1O60741 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HCN1O60741 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.15■□□□□ 0.34
HCN1O60741 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCN1O60741 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCN1O60741 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.15■□□□□ 0.34
HCN1O60741 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.15■□□□□ 0.34
HCN1O60741 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCN1O60741 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.15■□□□□ 0.34
HCN1O60741 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCN1O60741 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.15■□□□□ 0.34
HCN1O60741 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.15■□□□□ 0.34
HCN1O60741 NOC2LP1-202ENST00000452600 2235 ntBASIC17.15■□□□□ 0.34
HCN1O60741 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCN1O60741 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.15■□□□□ 0.34
HCN1O60741 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCN1O60741 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCN1O60741 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HCN1O60741 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCN1O60741 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
HCN1O60741 YBX1P2-201ENST00000489612 999 ntBASIC17.15■□□□□ 0.34
HCN1O60741 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.15■□□□□ 0.34
HCN1O60741 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.15■□□□□ 0.34
HCN1O60741 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HCN1O60741 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.15■□□□□ 0.34
HCN1O60741 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HCN1O60741 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.15■□□□□ 0.34
HCN1O60741 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCN1O60741 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCN1O60741 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.15■□□□□ 0.34
HCN1O60741 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCN1O60741 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCN1O60741 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCN1O60741 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.15■□□□□ 0.34
HCN1O60741 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
HCN1O60741 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
HCN1O60741 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCN1O60741 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCN1O60741 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.15■□□□□ 0.34
HCN1O60741 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCN1O60741 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCN1O60741 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.14■□□□□ 0.33
HCN1O60741 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCN1O60741 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCN1O60741 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.14■□□□□ 0.33
HCN1O60741 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.14■□□□□ 0.33
HCN1O60741 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCN1O60741 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.14■□□□□ 0.33
HCN1O60741 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.14■□□□□ 0.33
HCN1O60741 FAM8A6P-201ENST00000407496 1135 ntBASIC17.14■□□□□ 0.33
HCN1O60741 TSPY5P-201ENST00000426936 936 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms