Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.4■■□□□ 1.02
CTNND1O60716 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.4■■□□□ 1.02
CTNND1O60716 AC005336.2-201ENST00000593183 939 ntBASIC21.4■■□□□ 1.02
CTNND1O60716 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTNND1O60716 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.4■■□□□ 1.02
CTNND1O60716 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.4■■□□□ 1.02
CTNND1O60716 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.4■■□□□ 1.02
CTNND1O60716 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTNND1O60716 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTNND1O60716 MYLKP1-201ENST00000509077 1580 ntBASIC21.4■■□□□ 1.02
CTNND1O60716 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.4■■□□□ 1.02
CTNND1O60716 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CTNND1O60716 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTNND1O60716 IL9RP2-201ENST00000423948 1312 ntBASIC21.39■■□□□ 1.01
CTNND1O60716 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTNND1O60716 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTNND1O60716 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.39■■□□□ 1.01
CTNND1O60716 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.39■■□□□ 1.01
CTNND1O60716 RCN1P2-201ENST00000398357 915 ntBASIC21.39■■□□□ 1.01
CTNND1O60716 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CTNND1O60716 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.39■■□□□ 1.01
CTNND1O60716 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.39■■□□□ 1.01
CTNND1O60716 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.39■■□□□ 1.01
CTNND1O60716 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTNND1O60716 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CTNND1O60716 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.39■■□□□ 1.01
CTNND1O60716 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTNND1O60716 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.39■■□□□ 1.01
CTNND1O60716 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTNND1O60716 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CTNND1O60716 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTNND1O60716 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CTNND1O60716 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTNND1O60716 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.39■■□□□ 1.01
CTNND1O60716 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.39■■□□□ 1.01
CTNND1O60716 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CTNND1O60716 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTNND1O60716 AL024508.2-201ENST00000607749 1894 ntBASIC21.39■■□□□ 1.01
CTNND1O60716 AC112777.1-201ENST00000540175 1423 ntBASIC21.38■■□□□ 1.01
CTNND1O60716 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CTNND1O60716 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.38■■□□□ 1.01
CTNND1O60716 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CTNND1O60716 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTNND1O60716 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.38■■□□□ 1.01
CTNND1O60716 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.38■■□□□ 1.01
CTNND1O60716 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CTNND1O60716 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.38■■□□□ 1.01
CTNND1O60716 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CTNND1O60716 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.38■■□□□ 1.01
CTNND1O60716 AL031284.1-201ENST00000419297 478 ntBASIC21.38■■□□□ 1.01
CTNND1O60716 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.38■■□□□ 1.01
CTNND1O60716 AF186996.4-201ENST00000467186 377 ntBASIC21.38■■□□□ 1.01
CTNND1O60716 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.38■■□□□ 1.01
CTNND1O60716 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.38■■□□□ 1.01
CTNND1O60716 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTNND1O60716 AC008608.2-201ENST00000606089 416 ntBASIC21.38■■□□□ 1.01
CTNND1O60716 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CTNND1O60716 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTNND1O60716 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CTNND1O60716 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.38■■□□□ 1.01
CTNND1O60716 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.38■■□□□ 1.01
CTNND1O60716 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTNND1O60716 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTNND1O60716 TP73-AS1-210ENST00000637775 1455 ntBASIC21.38■■□□□ 1.01
CTNND1O60716 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTNND1O60716 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CTNND1O60716 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.37■■□□□ 1.01
CTNND1O60716 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.37■■□□□ 1.01
CTNND1O60716 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTNND1O60716 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTNND1O60716 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTNND1O60716 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CTNND1O60716 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CTNND1O60716 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.37■■□□□ 1.01
CTNND1O60716 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTNND1O60716 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTNND1O60716 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTNND1O60716 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CTNND1O60716 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.37■■□□□ 1.01
CTNND1O60716 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.37■■□□□ 1.01
CTNND1O60716 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.37■■□□□ 1.01
CTNND1O60716 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.37■■□□□ 1.01
CTNND1O60716 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.37■■□□□ 1.01
CTNND1O60716 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CTNND1O60716 AF228730.7-201ENST00000641842 219 ntBASIC21.37■■□□□ 1.01
CTNND1O60716 AL049812.1-201ENST00000432563 2267 ntBASIC21.37■■□□□ 1.01
CTNND1O60716 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTNND1O60716 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CTNND1O60716 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.37■■□□□ 1.01
CTNND1O60716 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTNND1O60716 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.37■■□□□ 1.01
CTNND1O60716 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTNND1O60716 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTNND1O60716 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CTNND1O60716 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.37■■□□□ 1.01
CTNND1O60716 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.36■■□□□ 1.01
CTNND1O60716 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTNND1O60716 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CTNND1O60716 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTNND1O60716 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms