Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
URB1O60287 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
URB1O60287 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.31■□□□□ 0.36
URB1O60287 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.31■□□□□ 0.36
URB1O60287 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.31■□□□□ 0.36
URB1O60287 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.31■□□□□ 0.36
URB1O60287 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
URB1O60287 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.31■□□□□ 0.36
URB1O60287 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.3■□□□□ 0.36
URB1O60287 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
URB1O60287 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.3■□□□□ 0.36
URB1O60287 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
URB1O60287 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.3■□□□□ 0.36
URB1O60287 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.3■□□□□ 0.36
URB1O60287 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
URB1O60287 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
URB1O60287 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
URB1O60287 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.3■□□□□ 0.36
URB1O60287 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
URB1O60287 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
URB1O60287 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.3■□□□□ 0.36
URB1O60287 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.3■□□□□ 0.36
URB1O60287 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.3■□□□□ 0.36
URB1O60287 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
URB1O60287 RBM17P3-201ENST00000417687 1192 ntBASIC17.3■□□□□ 0.36
URB1O60287 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
URB1O60287 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.3■□□□□ 0.36
URB1O60287 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
URB1O60287 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.3■□□□□ 0.36
URB1O60287 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.3■□□□□ 0.36
URB1O60287 HLA-J-201ENST00000462773 1622 ntBASIC17.29■□□□□ 0.36
URB1O60287 AL109659.2-201ENST00000606809 1674 ntBASIC17.29■□□□□ 0.36
URB1O60287 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
URB1O60287 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
URB1O60287 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.29■□□□□ 0.36
URB1O60287 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
URB1O60287 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
URB1O60287 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
URB1O60287 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
URB1O60287 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
URB1O60287 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
URB1O60287 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.29■□□□□ 0.36
URB1O60287 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
URB1O60287 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.29■□□□□ 0.36
URB1O60287 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
URB1O60287 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
URB1O60287 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
URB1O60287 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.29■□□□□ 0.36
URB1O60287 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.29■□□□□ 0.36
URB1O60287 AC023274.1-201ENST00000418278 595 ntBASIC17.29■□□□□ 0.36
URB1O60287 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.29■□□□□ 0.36
URB1O60287 SART3-203ENST00000546611 1184 ntBASIC17.29■□□□□ 0.36
URB1O60287 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.29■□□□□ 0.36
URB1O60287 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
URB1O60287 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
URB1O60287 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
URB1O60287 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
URB1O60287 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
URB1O60287 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
URB1O60287 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
URB1O60287 AP005117.1-201ENST00000584346 1413 ntBASIC17.28■□□□□ 0.36
URB1O60287 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
URB1O60287 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
URB1O60287 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.28■□□□□ 0.36
URB1O60287 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
URB1O60287 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.28■□□□□ 0.36
URB1O60287 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.28■□□□□ 0.36
URB1O60287 AC114341.1-201ENST00000618070 349 ntBASIC17.28■□□□□ 0.36
URB1O60287 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.28■□□□□ 0.36
URB1O60287 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
URB1O60287 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
URB1O60287 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms