Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PEX1O43933 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PEX1O43933 KRT16P1-201ENST00000399124 1418 ntBASIC17.91■□□□□ 0.46
PEX1O43933 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.91■□□□□ 0.46
PEX1O43933 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.91■□□□□ 0.46
PEX1O43933 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.91■□□□□ 0.46
PEX1O43933 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PEX1O43933 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.91■□□□□ 0.46
PEX1O43933 AC087499.1-201ENST00000418141 1075 ntBASIC17.91■□□□□ 0.46
PEX1O43933 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.91■□□□□ 0.46
PEX1O43933 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.91■□□□□ 0.46
PEX1O43933 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
PEX1O43933 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.91■□□□□ 0.46
PEX1O43933 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PEX1O43933 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PEX1O43933 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PEX1O43933 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.91■□□□□ 0.46
PEX1O43933 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PEX1O43933 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.91■□□□□ 0.46
PEX1O43933 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PEX1O43933 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PEX1O43933 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PEX1O43933 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PEX1O43933 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PEX1O43933 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PEX1O43933 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PEX1O43933 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PEX1O43933 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PEX1O43933 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PEX1O43933 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
PEX1O43933 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PEX1O43933 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PEX1O43933 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
PEX1O43933 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PEX1O43933 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PEX1O43933 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PEX1O43933 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PEX1O43933 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.9■□□□□ 0.46
PEX1O43933 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.9■□□□□ 0.46
PEX1O43933 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.9■□□□□ 0.46
PEX1O43933 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.9■□□□□ 0.46
PEX1O43933 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.9■□□□□ 0.46
PEX1O43933 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PEX1O43933 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PEX1O43933 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PEX1O43933 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PEX1O43933 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PEX1O43933 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PEX1O43933 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
PEX1O43933 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PEX1O43933 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.89■□□□□ 0.46
PEX1O43933 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PEX1O43933 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.89■□□□□ 0.45
PEX1O43933 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.89■□□□□ 0.45
PEX1O43933 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PEX1O43933 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PEX1O43933 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PEX1O43933 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.89■□□□□ 0.45
PEX1O43933 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.89■□□□□ 0.45
PEX1O43933 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PEX1O43933 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PEX1O43933 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PEX1O43933 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.89■□□□□ 0.45
PEX1O43933 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.89■□□□□ 0.45
PEX1O43933 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PEX1O43933 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PEX1O43933 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.89■□□□□ 0.45
PEX1O43933 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PEX1O43933 REXO1L10P-201ENST00000615707 1290 ntBASIC17.89■□□□□ 0.45
PEX1O43933 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.89■□□□□ 0.45
PEX1O43933 AC133561.5-201ENST00000635547 218 ntBASIC17.89■□□□□ 0.45
PEX1O43933 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PEX1O43933 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PEX1O43933 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PEX1O43933 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PEX1O43933 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PEX1O43933 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PEX1O43933 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PEX1O43933 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PEX1O43933 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PEX1O43933 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
PEX1O43933 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PEX1O43933 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
PEX1O43933 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PEX1O43933 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.88■□□□□ 0.45
PEX1O43933 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PEX1O43933 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PEX1O43933 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PEX1O43933 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PEX1O43933 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.88■□□□□ 0.45
PEX1O43933 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PEX1O43933 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
PEX1O43933 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PEX1O43933 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PEX1O43933 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PEX1O43933 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PEX1O43933 MMP23A-201ENST00000234610 1017 ntBASIC17.88■□□□□ 0.45
PEX1O43933 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.88■□□□□ 0.45
PEX1O43933 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PEX1O43933 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms