Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.24□□□□□ -0.13
PDE6DO43924 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.24□□□□□ -0.13
PDE6DO43924 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PDE6DO43924 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.24□□□□□ -0.13
PDE6DO43924 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 AC005829.2-201ENST00000571422 1056 ntBASIC14.24□□□□□ -0.13
PDE6DO43924 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.24□□□□□ -0.13
PDE6DO43924 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.24□□□□□ -0.13
PDE6DO43924 BID-214ENST00000617586 542 ntTSL 5 BASIC14.24□□□□□ -0.13
PDE6DO43924 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
PDE6DO43924 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PDE6DO43924 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PDE6DO43924 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 KRT8P32-201ENST00000512863 1461 ntBASIC14.24□□□□□ -0.13
PDE6DO43924 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
PDE6DO43924 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.24□□□□□ -0.13
PDE6DO43924 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDE6DO43924 AC010980.2-201ENST00000587099 1412 ntBASIC14.24□□□□□ -0.13
PDE6DO43924 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PDE6DO43924 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.23□□□□□ -0.13
PDE6DO43924 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PDE6DO43924 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PDE6DO43924 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.23□□□□□ -0.13
PDE6DO43924 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 MYLKP1-201ENST00000509077 1580 ntBASIC14.23□□□□□ -0.13
PDE6DO43924 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 AL357033.4-201ENST00000617703 1807 ntBASIC14.23□□□□□ -0.13
PDE6DO43924 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PDE6DO43924 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PDE6DO43924 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.23□□□□□ -0.13
PDE6DO43924 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.23□□□□□ -0.13
PDE6DO43924 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.23□□□□□ -0.13
PDE6DO43924 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.23□□□□□ -0.13
PDE6DO43924 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PDE6DO43924 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PDE6DO43924 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PDE6DO43924 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PDE6DO43924 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.23□□□□□ -0.13
PDE6DO43924 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDE6DO43924 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.23□□□□□ -0.13
PDE6DO43924 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PDE6DO43924 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.22□□□□□ -0.13
PDE6DO43924 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 KRT17P1-201ENST00000399211 1546 ntBASIC14.22□□□□□ -0.13
PDE6DO43924 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PDE6DO43924 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.22□□□□□ -0.13
PDE6DO43924 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.22□□□□□ -0.13
PDE6DO43924 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
PDE6DO43924 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.22□□□□□ -0.13
PDE6DO43924 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.22□□□□□ -0.13
PDE6DO43924 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.22□□□□□ -0.13
PDE6DO43924 AC142381.2-201ENST00000566120 298 ntBASIC14.22□□□□□ -0.13
PDE6DO43924 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.22□□□□□ -0.13
PDE6DO43924 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PDE6DO43924 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.22□□□□□ -0.13
PDE6DO43924 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.22□□□□□ -0.13
PDE6DO43924 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PDE6DO43924 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
PDE6DO43924 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms