Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 AL109659.2-201ENST00000606809 1674 ntBASIC18.38■□□□□ 0.53
COPEO14579 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COPEO14579 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
COPEO14579 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.38■□□□□ 0.53
COPEO14579 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.38■□□□□ 0.53
COPEO14579 AC004951.3-201ENST00000418645 1148 ntBASIC18.38■□□□□ 0.53
COPEO14579 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.38■□□□□ 0.53
COPEO14579 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
COPEO14579 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.38■□□□□ 0.53
COPEO14579 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.38■□□□□ 0.53
COPEO14579 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.38■□□□□ 0.53
COPEO14579 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.38■□□□□ 0.53
COPEO14579 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPEO14579 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COPEO14579 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COPEO14579 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
COPEO14579 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPEO14579 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.37■□□□□ 0.53
COPEO14579 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPEO14579 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
COPEO14579 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPEO14579 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
COPEO14579 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
COPEO14579 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPEO14579 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COPEO14579 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
COPEO14579 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.37■□□□□ 0.53
COPEO14579 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
COPEO14579 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPEO14579 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.37■□□□□ 0.53
COPEO14579 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.37■□□□□ 0.53
COPEO14579 CKBP1-201ENST00000565489 1086 ntBASIC18.37■□□□□ 0.53
COPEO14579 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
COPEO14579 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.37■□□□□ 0.53
COPEO14579 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.37■□□□□ 0.53
COPEO14579 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPEO14579 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.37■□□□□ 0.53
COPEO14579 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.37■□□□□ 0.53
COPEO14579 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.37■□□□□ 0.53
COPEO14579 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
COPEO14579 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.37■□□□□ 0.53
COPEO14579 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPEO14579 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
COPEO14579 SIRPAP1-201ENST00000448467 1770 ntBASIC18.37■□□□□ 0.53
COPEO14579 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COPEO14579 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPEO14579 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPEO14579 AC012317.2-201ENST00000623305 2251 ntBASIC18.37■□□□□ 0.53
COPEO14579 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPEO14579 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
COPEO14579 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPEO14579 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COPEO14579 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPEO14579 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPEO14579 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPEO14579 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPEO14579 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COPEO14579 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPEO14579 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.36■□□□□ 0.53
COPEO14579 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
COPEO14579 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COPEO14579 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPEO14579 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.36■□□□□ 0.53
COPEO14579 AP000593.1-201ENST00000393668 712 ntBASIC18.36■□□□□ 0.53
COPEO14579 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.36■□□□□ 0.53
COPEO14579 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.36■□□□□ 0.53
COPEO14579 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.36■□□□□ 0.53
COPEO14579 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPEO14579 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.36■□□□□ 0.53
COPEO14579 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.36■□□□□ 0.53
COPEO14579 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.36■□□□□ 0.53
COPEO14579 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPEO14579 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
COPEO14579 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.36■□□□□ 0.53
COPEO14579 AC104771.1-201ENST00000603335 964 ntBASIC18.36■□□□□ 0.53
COPEO14579 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COPEO14579 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.36■□□□□ 0.53
COPEO14579 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPEO14579 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPEO14579 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPEO14579 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms