Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN4O14493 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN4O14493 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CLDN4O14493 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLDN4O14493 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CLDN4O14493 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN4O14493 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN4O14493 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN4O14493 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLDN4O14493 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN4O14493 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN4O14493 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN4O14493 KRT18P38-201ENST00000449496 1282 ntBASIC17.28■□□□□ 0.36
CLDN4O14493 AL671277.2-201ENST00000458060 996 ntBASIC17.28■□□□□ 0.36
CLDN4O14493 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.28■□□□□ 0.36
CLDN4O14493 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN4O14493 AC087388.1-201ENST00000571370 1112 ntBASIC17.28■□□□□ 0.36
CLDN4O14493 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.28■□□□□ 0.36
CLDN4O14493 AL136038.4-201ENST00000603606 1261 ntBASIC17.28■□□□□ 0.36
CLDN4O14493 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.28■□□□□ 0.36
CLDN4O14493 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN4O14493 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN4O14493 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN4O14493 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CLDN4O14493 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CLDN4O14493 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN4O14493 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN4O14493 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN4O14493 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN4O14493 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN4O14493 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN4O14493 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN4O14493 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN4O14493 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN4O14493 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN4O14493 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN4O14493 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN4O14493 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN4O14493 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN4O14493 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN4O14493 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN4O14493 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN4O14493 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
CLDN4O14493 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN4O14493 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CLDN4O14493 LINC01311-201ENST00000565162 1445 ntBASIC17.27■□□□□ 0.35
CLDN4O14493 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.27■□□□□ 0.35
CLDN4O14493 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN4O14493 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
CLDN4O14493 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN4O14493 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN4O14493 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CLDN4O14493 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN4O14493 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN4O14493 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN4O14493 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLDN4O14493 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN4O14493 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN4O14493 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CLDN4O14493 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN4O14493 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN4O14493 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN4O14493 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN4O14493 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN4O14493 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN4O14493 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN4O14493 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN4O14493 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN4O14493 AL391807.1-203ENST00000604392 2365 ntBASIC17.26■□□□□ 0.35
CLDN4O14493 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN4O14493 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN4O14493 SDHAP2-201ENST00000455183 2001 ntBASIC17.26■□□□□ 0.35
CLDN4O14493 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN4O14493 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN4O14493 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN4O14493 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN4O14493 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN4O14493 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN4O14493 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN4O14493 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms