Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA3F8WFD2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA3F8WFD2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPA3F8WFD2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPA3F8WFD2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA3F8WFD2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPA3F8WFD2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA3F8WFD2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA3F8WFD2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA3F8WFD2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA3F8WFD2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPA3F8WFD2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA3F8WFD2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NPIPA3F8WFD2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 HLA-F-220ENST00000434407 884 ntBASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 AC104390.1-201ENST00000555663 520 ntBASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 AL162741.1-201ENST00000565563 1558 ntBASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NPIPA3F8WFD2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NPIPA3F8WFD2 HOXB1-202ENST00000577092 1414 ntBASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 AC034236.2-201ENST00000606662 1610 ntBASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 Z98044.1-201ENST00000632503 1764 ntBASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 AL450487.1-201ENST00000426799 995 ntBASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 TSSC2-201ENST00000450217 709 ntBASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 AC092329.2-201ENST00000598402 547 ntBASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 NPAP1P7-201ENST00000613027 823 ntBASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 AC012313.10-201ENST00000623509 926 ntBASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.7■□□□□ 0.26
NPIPA3F8WFD2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 AC093525.10-201ENST00000625130 1569 ntBASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 AC004408.2-201ENST00000623613 2777 ntBASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 AC016734.2-201ENST00000624325 1377 ntBASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms