Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 CYP2T1P-201ENST00000432607 1285 ntBASIC13.06□□□□□ -0.32
LINC01549A6NIU2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 AC124283.5-201ENST00000624661 1809 ntBASIC13.06□□□□□ -0.32
LINC01549A6NIU2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC01549A6NIU2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 AL160286.2-201ENST00000567150 934 ntBASIC13.05□□□□□ -0.32
LINC01549A6NIU2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 RALB-208ENST00000631312 311 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 AC080080.1-201ENST00000625121 2420 ntBASIC13.05□□□□□ -0.32
LINC01549A6NIU2 AC006116.8-202ENST00000587620 1550 ntBASIC13.05□□□□□ -0.32
LINC01549A6NIU2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.05□□□□□ -0.32
LINC01549A6NIU2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 MYLKP1-201ENST00000509077 1580 ntBASIC13.04□□□□□ -0.32
LINC01549A6NIU2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms