Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
LINC01546A6NGU7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC12.96□□□□□ -0.34
LINC01546A6NGU7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 UBALD1-205ENST00000590891 2641 ntBASIC12.95□□□□□ -0.34
LINC01546A6NGU7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 NME6-213ENST00000451657 871 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 C1QL1P1-201ENST00000568105 661 ntBASIC12.95□□□□□ -0.34
LINC01546A6NGU7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01546A6NGU7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 PCDH8P1-201ENST00000428983 2773 ntBASIC12.94□□□□□ -0.34
LINC01546A6NGU7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 LINC00304-203ENST00000565008 1864 ntBASIC12.94□□□□□ -0.34
LINC01546A6NGU7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 NTF6G-201ENST00000591094 616 ntBASIC12.94□□□□□ -0.34
LINC01546A6NGU7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 CICP6-201ENST00000457191 2729 ntBASIC12.94□□□□□ -0.34
LINC01546A6NGU7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01546A6NGU7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 HLA-J-201ENST00000462773 1622 ntBASIC12.93□□□□□ -0.34
LINC01546A6NGU7 LINC01126-201ENST00000623515 1646 ntBASIC12.93□□□□□ -0.34
LINC01546A6NGU7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms