Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 AF228730.6-201ENST00000641497 218 ntBASIC17.47■□□□□ 0.39
CNOT1A5YKK6 AC084121.3-201ENST00000641716 218 ntBASIC17.47■□□□□ 0.39
CNOT1A5YKK6 AC105233.6-201ENST00000642093 218 ntBASIC17.47■□□□□ 0.39
CNOT1A5YKK6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 KRT8P32-201ENST00000512863 1461 ntBASIC17.47■□□□□ 0.39
CNOT1A5YKK6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT1A5YKK6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 AC087641.1-201ENST00000557561 1021 ntBASIC17.46■□□□□ 0.39
CNOT1A5YKK6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 AC005498.2-205ENST00000593218 784 ntBASIC17.46■□□□□ 0.39
CNOT1A5YKK6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 ELL2P1-201ENST00000413990 1906 ntBASIC17.46■□□□□ 0.39
CNOT1A5YKK6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 TEX21P-204ENST00000641479 1693 ntBASIC17.46■□□□□ 0.39
CNOT1A5YKK6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT1A5YKK6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.46■□□□□ 0.38
CNOT1A5YKK6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 AC005034.1-201ENST00000426657 489 ntBASIC17.45■□□□□ 0.38
CNOT1A5YKK6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNOT1A5YKK6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 AC005225.4-201ENST00000557330 545 ntBASIC17.44■□□□□ 0.38
CNOT1A5YKK6 AL513190.1-201ENST00000621254 727 ntBASIC17.44■□□□□ 0.38
CNOT1A5YKK6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms