Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AL138966.2-201ENST00000621997 464 ntBASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC162PA2VCL2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 AC010203.1-204ENST00000548782 407 ntBASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 NEK4P2-201ENST00000580004 1012 ntBASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 AC010240.3-201ENST00000607688 395 ntBASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC162PA2VCL2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 AC141257.4-201ENST00000634557 245 ntBASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 AC136944.6-201ENST00000634818 245 ntBASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 AC097493.4-201ENST00000641197 219 ntBASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC162PA2VCL2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 GMCL1P1-201ENST00000463439 1581 ntBASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 MIR3180-4-201ENST00000582223 153 ntBASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms