Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC27.04■■□□□ 1.92
HFM1A2PYH4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC27.04■■□□□ 1.92
HFM1A2PYH4 AP000867.3-201ENST00000524675 377 ntBASIC27.04■■□□□ 1.92
HFM1A2PYH4 Z69720.1-201ENST00000601483 472 ntBASIC27.04■■□□□ 1.92
HFM1A2PYH4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
HFM1A2PYH4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC27.04■■□□□ 1.92
HFM1A2PYH4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
HFM1A2PYH4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
HFM1A2PYH4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
HFM1A2PYH4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
HFM1A2PYH4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
HFM1A2PYH4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC27.03■■□□□ 1.92
HFM1A2PYH4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
HFM1A2PYH4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
HFM1A2PYH4 CCS-201ENST00000310190 942 ntTSL 5 BASIC27.03■■□□□ 1.92
HFM1A2PYH4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
HFM1A2PYH4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
HFM1A2PYH4 AC068472.1-201ENST00000474589 881 ntBASIC27.03■■□□□ 1.92
HFM1A2PYH4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC27.03■■□□□ 1.92
HFM1A2PYH4 AC074051.2-201ENST00000565115 352 ntBASIC27.03■■□□□ 1.92
HFM1A2PYH4 PRELID1P1-202ENST00000567272 903 ntBASIC27.03■■□□□ 1.92
HFM1A2PYH4 BNIP3P18-201ENST00000593976 575 ntBASIC27.03■■□□□ 1.92
HFM1A2PYH4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC27.03■■□□□ 1.92
HFM1A2PYH4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
HFM1A2PYH4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC27.03■■□□□ 1.92
HFM1A2PYH4 NSUN5P1-202ENST00000421140 1535 ntBASIC27.03■■□□□ 1.92
HFM1A2PYH4 NSUN5P2-203ENST00000457352 1529 ntBASIC27.03■■□□□ 1.92
HFM1A2PYH4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
HFM1A2PYH4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
HFM1A2PYH4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
HFM1A2PYH4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC27.02■■□□□ 1.92
HFM1A2PYH4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
HFM1A2PYH4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC27.02■■□□□ 1.92
HFM1A2PYH4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC27.02■■□□□ 1.92
HFM1A2PYH4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC27.02■■□□□ 1.92
HFM1A2PYH4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
HFM1A2PYH4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
HFM1A2PYH4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
HFM1A2PYH4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
HFM1A2PYH4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
HFM1A2PYH4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
HFM1A2PYH4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.92
HFM1A2PYH4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC27.01■■□□□ 1.91
HFM1A2PYH4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC27.01■■□□□ 1.91
HFM1A2PYH4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
HFM1A2PYH4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
HFM1A2PYH4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
HFM1A2PYH4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
HFM1A2PYH4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
HFM1A2PYH4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC27.01■■□□□ 1.91
HFM1A2PYH4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
HFM1A2PYH4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
HFM1A2PYH4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
HFM1A2PYH4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
HFM1A2PYH4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC27.01■■□□□ 1.91
HFM1A2PYH4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC27■■□□□ 1.91
HFM1A2PYH4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
HFM1A2PYH4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC27■■□□□ 1.91
HFM1A2PYH4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC27■■□□□ 1.91
HFM1A2PYH4 TSPY19P-201ENST00000418461 509 ntBASIC27■■□□□ 1.91
HFM1A2PYH4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC27■■□□□ 1.91
HFM1A2PYH4 TSPY18P-201ENST00000441642 509 ntBASIC27■■□□□ 1.91
HFM1A2PYH4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC27■■□□□ 1.91
HFM1A2PYH4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC27■■□□□ 1.91
HFM1A2PYH4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC27■■□□□ 1.91
HFM1A2PYH4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC27■■□□□ 1.91
HFM1A2PYH4 AC104819.1-201ENST00000504587 486 ntBASIC27■■□□□ 1.91
HFM1A2PYH4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC27■■□□□ 1.91
HFM1A2PYH4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
HFM1A2PYH4 AL138831.2-201ENST00000606564 490 ntBASIC27■■□□□ 1.91
HFM1A2PYH4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
HFM1A2PYH4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC27■■□□□ 1.91
HFM1A2PYH4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC27■■□□□ 1.91
HFM1A2PYH4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
HFM1A2PYH4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC27■■□□□ 1.91
HFM1A2PYH4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
HFM1A2PYH4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
HFM1A2PYH4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC27■■□□□ 1.91
HFM1A2PYH4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
HFM1A2PYH4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC27■■□□□ 1.91
HFM1A2PYH4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC27■■□□□ 1.91
HFM1A2PYH4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC26.99■■□□□ 1.91
HFM1A2PYH4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
HFM1A2PYH4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
HFM1A2PYH4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC26.99■■□□□ 1.91
HFM1A2PYH4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC26.99■■□□□ 1.91
HFM1A2PYH4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
HFM1A2PYH4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC26.99■■□□□ 1.91
HFM1A2PYH4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC26.99■■□□□ 1.91
HFM1A2PYH4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC26.99■■□□□ 1.91
HFM1A2PYH4 ABR-217ENST00000572441 563 ntTSL 4 BASIC26.99■■□□□ 1.91
HFM1A2PYH4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC26.99■■□□□ 1.91
HFM1A2PYH4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC26.99■■□□□ 1.91
HFM1A2PYH4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
HFM1A2PYH4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
HFM1A2PYH4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
HFM1A2PYH4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
HFM1A2PYH4 AC087289.5-201ENST00000586076 3175 ntBASIC26.99■■□□□ 1.91
HFM1A2PYH4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
HFM1A2PYH4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms