Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 AP000692.2-201ENST00000608391 879 ntBASIC18.4■□□□□ 0.54
CCDC189A1A4V9 DGCR10-201ENST00000609839 495 ntBASIC18.4■□□□□ 0.54
CCDC189A1A4V9 CR392000.1-201ENST00000624770 1228 ntBASIC18.4■□□□□ 0.54
CCDC189A1A4V9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC189A1A4V9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC189A1A4V9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC189A1A4V9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.39■□□□□ 0.54
CCDC189A1A4V9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 AL109659.2-201ENST00000606809 1674 ntBASIC18.39■□□□□ 0.53
CCDC189A1A4V9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 B3GAT3P1-201ENST00000471720 806 ntBASIC18.39■□□□□ 0.53
CCDC189A1A4V9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 MIR6786-201ENST00000616843 113 ntBASIC18.39■□□□□ 0.53
CCDC189A1A4V9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC189A1A4V9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 AC096733.2-201ENST00000609937 1394 ntBASIC18.38■□□□□ 0.53
CCDC189A1A4V9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC189A1A4V9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms