Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AC011558.1-201ENST00000623459 338 ntBASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TCRBV4S1A1TA0A5B7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ABALON-201ENST00000629058 1903 ntBASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 KRT8P45-201ENST00000414328 1447 ntBASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AP000523.1-201ENST00000398242 1049 ntBASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 TSPY23P-201ENST00000440136 739 ntBASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
TCRBV4S1A1TA0A5B7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 NOC2LP2-201ENST00000407594 1944 ntBASIC14.77□□□□□ -0.04
TCRBV4S1A1TA0A5B7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 HOMER2P1-201ENST00000455653 964 ntBASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AL023973.1-201ENST00000624619 620 ntBASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TCRBV4S1A1TA0A5B7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms