Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 RN7SL850P-201ENST00000579959 291 ntBASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC138932.1-201ENST00000534164 6830 ntBASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC196A0A1B0GTZ2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC196A0A1B0GTZ2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.33■■□□□ 1.01
CCDC196A0A1B0GTZ2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC196A0A1B0GTZ2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC196A0A1B0GTZ2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CCDC196A0A1B0GTZ2 TMPOP1-202ENST00000424642 1267 ntBASIC21.33■■□□□ 1.01
CCDC196A0A1B0GTZ2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC196A0A1B0GTZ2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC196A0A1B0GTZ2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.33■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC196A0A1B0GTZ2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC099343.3-201ENST00000605834 2503 ntBASIC21.33■■□□□ 1
CCDC196A0A1B0GTZ2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC196A0A1B0GTZ2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC196A0A1B0GTZ2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC196A0A1B0GTZ2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC196A0A1B0GTZ2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.33■■□□□ 1
CCDC196A0A1B0GTZ2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC196A0A1B0GTZ2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC196A0A1B0GTZ2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
CCDC196A0A1B0GTZ2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC196A0A1B0GTZ2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC196A0A1B0GTZ2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 AC093677.2-201ENST00000600169 1863 ntBASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 AC104076.2-201ENST00000448912 469 ntBASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 AC135776.1-201ENST00000319817 2481 ntBASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC196A0A1B0GTZ2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCDC196A0A1B0GTZ2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 AL024508.2-201ENST00000607749 1894 ntBASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms