Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 KRT18P55-202ENST00000578578 1546 ntBASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 KRT16P5-201ENST00000455284 522 ntBASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 PCDHA12-202ENST00000613593 2588 ntBASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC12.99□□□□□ -0.33
TRBV27A0A0K0K1C4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 AC004980.1-204ENST00000429707 299 ntBASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 AL023806.1-201ENST00000603994 1649 ntBASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC12.98□□□□□ -0.33
TRBV27A0A0K0K1C4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 PP12613-201ENST00000424958 2230 ntBASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 AC141586.5-201ENST00000624546 2050 ntBASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 AC099398.1-201ENST00000567919 2776 ntBASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms