Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 NIFKP9-201ENST00000419265 221 ntBASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 AC073195.1-201ENST00000607241 877 ntBASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 AC131212.4-201ENST00000623606 975 ntBASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 AF186192.3-201ENST00000583427 947 ntBASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 RPS2P55-201ENST00000397318 883 ntBASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 AC107956.1-201ENST00000494359 873 ntBASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 AC008550.1-201ENST00000511500 884 ntBASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms