Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 KRT8P50-201ENST00000562022 1438 ntBASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCH2Q9Y6C5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 AL035633.1-201ENST00000406139 838 ntBASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 AC244107.1-201ENST00000442033 332 ntBASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 SNHG9-202ENST00000564014 471 ntBASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 AC107918.4-202ENST00000641623 219 ntBASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCH2Q9Y6C5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 AC112907.3-201ENST00000577781 2400 ntBASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 MTDHP4-201ENST00000600287 670 ntBASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 AL139288.1-201ENST00000623748 933 ntBASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTCH2Q9Y6C5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PTCH2Q9Y6C5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTCH2Q9Y6C5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms