Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 AIRN-201ENST00000601203 4374 ntBASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 RPS2P28-201ENST00000314255 741 ntBASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 AC009533.2-201ENST00000543664 586 ntBASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 INTS4P1-201ENST00000438455 1935 ntBASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC2Q9Y5Z7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 FAM220CP-201ENST00000395253 831 ntBASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.16■□□□□ 0.66
HCFC2Q9Y5Z7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 AL138831.2-201ENST00000606564 490 ntBASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCFC2Q9Y5Z7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
HCFC2Q9Y5Z7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.14■□□□□ 0.66
HCFC2Q9Y5Z7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.14■□□□□ 0.66
HCFC2Q9Y5Z7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HCFC2Q9Y5Z7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HCFC2Q9Y5Z7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
HCFC2Q9Y5Z7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.14■□□□□ 0.65
HCFC2Q9Y5Z7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.14■□□□□ 0.65
HCFC2Q9Y5Z7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms