Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 AC104692.2-201ENST00000603054 253 ntBASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 AL732292.2-201ENST00000609649 430 ntBASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA9Q9Y5G4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 Z83836.1-201ENST00000624605 1642 ntBASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 AC104819.1-201ENST00000504587 486 ntBASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 KRT18P31-201ENST00000506277 1292 ntBASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 MIR3180-4-201ENST00000582223 153 ntBASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 AL031008.1-201ENST00000619963 541 ntBASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 CROCCP3-202ENST00000420820 1947 ntBASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA9Q9Y5G4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
PCDHGA9Q9Y5G4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 FOSL1P1-201ENST00000511041 816 ntBASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 RCC2P3-201ENST00000418112 1537 ntBASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGA9Q9Y5G4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms