Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 LTB4R2-202ENST00000528054 3092 ntBASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 RCN1P1-201ENST00000400413 996 ntBASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 CA15P1-201ENST00000481698 905 ntBASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 AC097488.1-201ENST00000507834 756 ntBASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 AC005363.2-201ENST00000618631 242 ntBASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGB3Q9Y5G1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGB3Q9Y5G1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGB3Q9Y5G1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGB3Q9Y5G1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 LINC01568-207ENST00000641790 1380 ntBASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 MFAP1P1-201ENST00000442257 1255 ntBASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 C2orf69P3-201ENST00000565542 1120 ntBASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 AC092865.7-201ENST00000641832 219 ntBASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB3Q9Y5G1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms