Protein–RNA interactions for Protein: Q9UBE0

SAE1, SUMO-activating enzyme subunit 1, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAE1Q9UBE0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 BX088651.1-201ENST00000540551 451 ntBASIC19.02■□□□□ 0.64
SAE1Q9UBE0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 AC116562.4-202ENST00000641738 218 ntBASIC19.02■□□□□ 0.64
SAE1Q9UBE0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SAE1Q9UBE0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.02■□□□□ 0.63
SAE1Q9UBE0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SAE1Q9UBE0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SAE1Q9UBE0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SAE1Q9UBE0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SAE1Q9UBE0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SAE1Q9UBE0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 AL163051.1-201ENST00000569214 1512 ntBASIC19.01■□□□□ 0.63
SAE1Q9UBE0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 AL596275.1-201ENST00000423464 877 ntBASIC19.01■□□□□ 0.63
SAE1Q9UBE0 KRT18P23-201ENST00000435622 1283 ntBASIC19.01■□□□□ 0.63
SAE1Q9UBE0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 AC010947.1-201ENST00000623454 693 ntBASIC19.01■□□□□ 0.63
SAE1Q9UBE0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SAE1Q9UBE0 AC008764.6-201ENST00000595909 2069 ntBASIC19.01■□□□□ 0.63
SAE1Q9UBE0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
SAE1Q9UBE0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19■□□□□ 0.63
SAE1Q9UBE0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19■□□□□ 0.63
SAE1Q9UBE0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 TSPY14P-201ENST00000303979 915 ntBASIC19■□□□□ 0.63
SAE1Q9UBE0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19■□□□□ 0.63
SAE1Q9UBE0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19■□□□□ 0.63
SAE1Q9UBE0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19■□□□□ 0.63
SAE1Q9UBE0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19■□□□□ 0.63
SAE1Q9UBE0 C2orf69P3-201ENST00000565542 1120 ntBASIC19■□□□□ 0.63
SAE1Q9UBE0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19■□□□□ 0.63
SAE1Q9UBE0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SAE1Q9UBE0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19■□□□□ 0.63
SAE1Q9UBE0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SAE1Q9UBE0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 PHGDH-209ENST00000641074 1780 ntBASIC19■□□□□ 0.63
SAE1Q9UBE0 AL096828.2-201ENST00000567259 1965 ntBASIC19■□□□□ 0.63
SAE1Q9UBE0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19■□□□□ 0.63
SAE1Q9UBE0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19■□□□□ 0.63
SAE1Q9UBE0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19■□□□□ 0.63
SAE1Q9UBE0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19■□□□□ 0.63
SAE1Q9UBE0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19■□□□□ 0.63
SAE1Q9UBE0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19■□□□□ 0.63
SAE1Q9UBE0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19■□□□□ 0.63
SAE1Q9UBE0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAE1Q9UBE0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SAE1Q9UBE0 GMCL1P1-201ENST00000463439 1581 ntBASIC18.99■□□□□ 0.63
SAE1Q9UBE0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAE1Q9UBE0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAE1Q9UBE0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms