Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTLC3Q9NUV7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTLC3Q9NUV7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTLC3Q9NUV7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTLC3Q9NUV7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPTLC3Q9NUV7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.25■□□□□ 0.83
SPTLC3Q9NUV7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.25■□□□□ 0.83
SPTLC3Q9NUV7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.25■□□□□ 0.83
SPTLC3Q9NUV7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.25■□□□□ 0.83
SPTLC3Q9NUV7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTLC3Q9NUV7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTLC3Q9NUV7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTLC3Q9NUV7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPTLC3Q9NUV7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPTLC3Q9NUV7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPTLC3Q9NUV7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.25■□□□□ 0.83
SPTLC3Q9NUV7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 AC008403.3-201ENST00000598924 454 ntBASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 AC104771.1-201ENST00000603335 964 ntBASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.24■□□□□ 0.83
SPTLC3Q9NUV7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 RCC2P6-201ENST00000526625 1557 ntBASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 UNC93B5-201ENST00000530315 699 ntBASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 AC142086.2-201ENST00000569753 217 ntBASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 AL162727.3-201ENST00000635661 2787 ntBASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 MYC-208ENST00000641036 567 ntBASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPTLC3Q9NUV7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTLC3Q9NUV7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms