Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HPS4Q9NQG7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS4Q9NQG7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HPS4Q9NQG7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HPS4Q9NQG7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS4Q9NQG7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HPS4Q9NQG7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19■□□□□ 0.63
HPS4Q9NQG7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS4Q9NQG7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS4Q9NQG7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 Z98044.1-201ENST00000632503 1764 ntBASIC18.99■□□□□ 0.63
HPS4Q9NQG7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 AC079781.3-201ENST00000449110 356 ntBASIC18.99■□□□□ 0.63
HPS4Q9NQG7 AC104819.1-201ENST00000504587 486 ntBASIC18.99■□□□□ 0.63
HPS4Q9NQG7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 AC074051.2-201ENST00000565115 352 ntBASIC18.99■□□□□ 0.63
HPS4Q9NQG7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 AC024563.2-201ENST00000603282 481 ntBASIC18.99■□□□□ 0.63
HPS4Q9NQG7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 LINC00167-201ENST00000530583 1419 ntBASIC18.99■□□□□ 0.63
HPS4Q9NQG7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS4Q9NQG7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 AL592071.1-201ENST00000611956 408 ntBASIC18.98■□□□□ 0.63
HPS4Q9NQG7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPS4Q9NQG7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 AP000347.1-202ENST00000435868 847 ntBASIC18.97■□□□□ 0.63
HPS4Q9NQG7 RN7SL606P-201ENST00000472779 293 ntBASIC18.97■□□□□ 0.63
HPS4Q9NQG7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 AC138894.3-201ENST00000603787 634 ntBASIC18.97■□□□□ 0.63
HPS4Q9NQG7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 KRT8P50-201ENST00000562022 1438 ntBASIC18.97■□□□□ 0.63
HPS4Q9NQG7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 AL357033.4-201ENST00000617703 1807 ntBASIC18.97■□□□□ 0.63
HPS4Q9NQG7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.97■□□□□ 0.63
HPS4Q9NQG7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms