Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
C12orf4Q9NQ89 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
C12orf4Q9NQ89 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
C12orf4Q9NQ89 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16■□□□□ 0.15
C12orf4Q9NQ89 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
C12orf4Q9NQ89 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
C12orf4Q9NQ89 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
C12orf4Q9NQ89 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
C12orf4Q9NQ89 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
C12orf4Q9NQ89 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
C12orf4Q9NQ89 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16■□□□□ 0.15
C12orf4Q9NQ89 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16■□□□□ 0.15
C12orf4Q9NQ89 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 AL136379.1-201ENST00000623471 2642 ntBASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 AC135776.1-201ENST00000319817 2481 ntBASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
C12orf4Q9NQ89 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 AC083880.1-201ENST00000608266 535 ntBASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C12orf4Q9NQ89 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 AL354751.1-201ENST00000412768 1863 ntBASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms