Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 AC009102.3-201ENST00000623118 1491 ntBASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 AC126763.1-201ENST00000552015 2118 ntBASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 AC090164.3-201ENST00000610780 2143 ntBASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP13A1Q9HD20 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP13A1Q9HD20 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 HLA-F-220ENST00000434407 884 ntBASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 VENTXP5-201ENST00000523979 775 ntBASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 AC104581.1-202ENST00000635932 2618 ntBASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A1Q9HD20 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP13A1Q9HD20 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms