Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 HEIH-201ENST00000623091 1652 ntBASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 AC007967.2-201ENST00000432613 625 ntBASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 MTDHP4-201ENST00000600287 670 ntBASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 AC107918.4-202ENST00000641623 219 ntBASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE28Q9HCC9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZFYVE28Q9HCC9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZFYVE28Q9HCC9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZFYVE28Q9HCC9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZFYVE28Q9HCC9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZFYVE28Q9HCC9 AC211486.1-202ENST00000416371 468 ntBASIC20.91■□□□□ 0.94
ZFYVE28Q9HCC9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.91■□□□□ 0.94
ZFYVE28Q9HCC9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ZFYVE28Q9HCC9 AC211476.1-201ENST00000503899 468 ntBASIC20.91■□□□□ 0.94
ZFYVE28Q9HCC9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZFYVE28Q9HCC9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.91■□□□□ 0.94
ZFYVE28Q9HCC9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.91■□□□□ 0.94
ZFYVE28Q9HCC9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.91■□□□□ 0.94
ZFYVE28Q9HCC9 NKAPP1-205ENST00000585790 367 ntBASIC20.91■□□□□ 0.94
ZFYVE28Q9HCC9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.91■□□□□ 0.94
ZFYVE28Q9HCC9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZFYVE28Q9HCC9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 AP002414.3-201ENST00000589352 1468 ntBASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 AC009102.3-201ENST00000623118 1491 ntBASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 AC023274.1-201ENST00000418278 595 ntBASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 AC112907.3-201ENST00000577781 2400 ntBASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.9■□□□□ 0.94
ZFYVE28Q9HCC9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZFYVE28Q9HCC9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZFYVE28Q9HCC9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.89■□□□□ 0.94
ZFYVE28Q9HCC9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZFYVE28Q9HCC9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZFYVE28Q9HCC9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ZFYVE28Q9HCC9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 KRT18P28-201ENST00000453838 1332 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms