Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
BRF2Q9HAW0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
BRF2Q9HAW0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.58■□□□□ 0.41
BRF2Q9HAW0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 HMGA1P5-201ENST00000412453 271 ntBASIC17.58■□□□□ 0.4
BRF2Q9HAW0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 REXO1L9P-201ENST00000604264 2108 ntBASIC17.58■□□□□ 0.4
BRF2Q9HAW0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 AL096828.2-201ENST00000567259 1965 ntBASIC17.58■□□□□ 0.4
BRF2Q9HAW0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.58■□□□□ 0.4
BRF2Q9HAW0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 NEK4P2-201ENST00000580004 1012 ntBASIC17.57■□□□□ 0.4
BRF2Q9HAW0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
BRF2Q9HAW0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 AC010240.3-201ENST00000607688 395 ntBASIC17.56■□□□□ 0.4
BRF2Q9HAW0 FAM87A-204ENST00000613235 858 ntBASIC17.56■□□□□ 0.4
BRF2Q9HAW0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.56■□□□□ 0.4
BRF2Q9HAW0 AC008764.6-201ENST00000595909 2069 ntBASIC17.56■□□□□ 0.4
BRF2Q9HAW0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms