Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 AC009065.1-201ENST00000564055 1225 ntBASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 AL133373.2-201ENST00000623187 2828 ntBASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 AL596275.1-201ENST00000423464 877 ntBASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC40Q9H9A6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 AC104390.1-201ENST00000555663 520 ntBASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 AL512604.3-201ENST00000569583 964 ntBASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 SDHAP2-201ENST00000455183 2001 ntBASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC40Q9H9A6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC40Q9H9A6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC40Q9H9A6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.64■□□□□ 0.58
LRRC40Q9H9A6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms