Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 AL355802.2-201ENST00000402069 882 ntBASIC19.17■□□□□ 0.66
DDX47Q9H0S4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 AC009053.2-201ENST00000563701 2365 ntBASIC19.17■□□□□ 0.66
DDX47Q9H0S4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 PHGDH-209ENST00000641074 1780 ntBASIC19.16■□□□□ 0.66
DDX47Q9H0S4 AC099398.1-201ENST00000567919 2776 ntBASIC19.16■□□□□ 0.66
DDX47Q9H0S4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 AC106820.2-201ENST00000563775 3264 ntBASIC19.16■□□□□ 0.66
DDX47Q9H0S4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 AC080080.1-201ENST00000625121 2420 ntBASIC19.16■□□□□ 0.66
DDX47Q9H0S4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 PRORSD1P-202ENST00000563365 2154 ntBASIC19.16■□□□□ 0.66
DDX47Q9H0S4 PCDHA12-202ENST00000613593 2588 ntBASIC19.16■□□□□ 0.66
DDX47Q9H0S4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
DDX47Q9H0S4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 PP12613-201ENST00000424958 2230 ntBASIC19.15■□□□□ 0.66
DDX47Q9H0S4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 AC008622.2-201ENST00000617006 1229 ntBASIC19.15■□□□□ 0.66
DDX47Q9H0S4 AC011298.2-201ENST00000617989 482 ntBASIC19.15■□□□□ 0.66
DDX47Q9H0S4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 GMCL1P1-201ENST00000463439 1581 ntBASIC19.15■□□□□ 0.66
DDX47Q9H0S4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX47Q9H0S4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
DDX47Q9H0S4 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.14■□□□□ 0.66
DDX47Q9H0S4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.14■□□□□ 0.66
DDX47Q9H0S4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
DDX47Q9H0S4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
DDX47Q9H0S4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.14■□□□□ 0.65
DDX47Q9H0S4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
DDX47Q9H0S4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX47Q9H0S4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.14■□□□□ 0.65
DDX47Q9H0S4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX47Q9H0S4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.14■□□□□ 0.65
DDX47Q9H0S4 AP002982.1-201ENST00000492365 877 ntBASIC19.14■□□□□ 0.65
DDX47Q9H0S4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.14■□□□□ 0.65
DDX47Q9H0S4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.14■□□□□ 0.65
DDX47Q9H0S4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
DDX47Q9H0S4 AC110285.5-201ENST00000611501 352 ntBASIC19.14■□□□□ 0.65
DDX47Q9H0S4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX47Q9H0S4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms