Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 HTR7P1-201ENST00000538670 1336 ntBASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD4Q9H0A8 REXO1L9P-201ENST00000604264 2108 ntBASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 NIFKP9-201ENST00000419265 221 ntBASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 AC004980.1-204ENST00000429707 299 ntBASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD4Q9H0A8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 AC004951.3-201ENST00000418645 1148 ntBASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 AC026366.1-201ENST00000488803 879 ntBASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 AP002982.1-201ENST00000492365 877 ntBASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 RNA5SP413-201ENST00000516373 109 ntBASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms