Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP4Q99727 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.86■□□□□ 0.29
TIMP4Q99727 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TIMP4Q99727 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
TIMP4Q99727 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP4Q99727 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP4Q99727 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP4Q99727 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP4Q99727 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
TIMP4Q99727 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.86■□□□□ 0.29
TIMP4Q99727 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.86■□□□□ 0.29
TIMP4Q99727 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.86■□□□□ 0.29
TIMP4Q99727 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TIMP4Q99727 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TIMP4Q99727 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP4Q99727 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP4Q99727 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP4Q99727 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP4Q99727 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TIMP4Q99727 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.86■□□□□ 0.29
TIMP4Q99727 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TIMP4Q99727 AC024243.1-201ENST00000609234 778 ntBASIC16.86■□□□□ 0.29
TIMP4Q99727 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.86■□□□□ 0.29
TIMP4Q99727 AL121956.5-201ENST00000625261 221 ntBASIC16.86■□□□□ 0.29
TIMP4Q99727 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP4Q99727 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP4Q99727 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP4Q99727 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP4Q99727 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP4Q99727 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.86■□□□□ 0.29
TIMP4Q99727 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP4Q99727 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
TIMP4Q99727 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TIMP4Q99727 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TIMP4Q99727 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TIMP4Q99727 AC126763.1-201ENST00000552015 2118 ntBASIC16.85■□□□□ 0.29
TIMP4Q99727 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TIMP4Q99727 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TIMP4Q99727 AC112907.2-201ENST00000448639 330 ntBASIC16.85■□□□□ 0.29
TIMP4Q99727 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.85■□□□□ 0.29
TIMP4Q99727 FAM86EP-206ENST00000510506 987 ntBASIC16.85■□□□□ 0.29
TIMP4Q99727 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.85■□□□□ 0.29
TIMP4Q99727 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.85■□□□□ 0.29
TIMP4Q99727 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.85■□□□□ 0.29
TIMP4Q99727 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.85■□□□□ 0.29
TIMP4Q99727 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TIMP4Q99727 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TIMP4Q99727 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TIMP4Q99727 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TIMP4Q99727 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.85■□□□□ 0.29
TIMP4Q99727 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.85■□□□□ 0.29
TIMP4Q99727 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.85■□□□□ 0.29
TIMP4Q99727 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.85■□□□□ 0.29
TIMP4Q99727 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TIMP4Q99727 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TIMP4Q99727 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TIMP4Q99727 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TIMP4Q99727 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.85■□□□□ 0.29
TIMP4Q99727 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.84■□□□□ 0.29
TIMP4Q99727 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.84■□□□□ 0.29
TIMP4Q99727 AC008556.1-201ENST00000610908 2040 ntBASIC16.84■□□□□ 0.29
TIMP4Q99727 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.84■□□□□ 0.29
TIMP4Q99727 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP4Q99727 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP4Q99727 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.84■□□□□ 0.29
TIMP4Q99727 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP4Q99727 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TIMP4Q99727 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP4Q99727 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.84■□□□□ 0.29
TIMP4Q99727 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.84■□□□□ 0.29
TIMP4Q99727 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.84■□□□□ 0.29
TIMP4Q99727 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.84■□□□□ 0.29
TIMP4Q99727 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.84■□□□□ 0.29
TIMP4Q99727 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TIMP4Q99727 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.84■□□□□ 0.29
TIMP4Q99727 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.84■□□□□ 0.29
TIMP4Q99727 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.84■□□□□ 0.29
TIMP4Q99727 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP4Q99727 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP4Q99727 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP4Q99727 KRT8P32-201ENST00000512863 1461 ntBASIC16.84■□□□□ 0.29
TIMP4Q99727 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
TIMP4Q99727 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP4Q99727 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TIMP4Q99727 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP4Q99727 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP4Q99727 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TIMP4Q99727 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMP4Q99727 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TIMP4Q99727 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP4Q99727 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP4Q99727 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP4Q99727 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP4Q99727 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP4Q99727 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.83■□□□□ 0.28
TIMP4Q99727 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.83■□□□□ 0.28
TIMP4Q99727 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP4Q99727 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.83■□□□□ 0.28
TIMP4Q99727 PCED1CP-201ENST00000419887 785 ntBASIC16.83■□□□□ 0.28
TIMP4Q99727 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms