Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 NPAP1P7-201ENST00000613027 823 ntBASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 AL353692.3-201ENST00000407031 1396 ntBASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.03■□□□□ 0.64
CDK5RAP1Q96SZ6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 GUSBP12-201ENST00000513727 720 ntBASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 AL024508.2-201ENST00000607749 1894 ntBASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDK5RAP1Q96SZ6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDK5RAP1Q96SZ6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CDK5RAP1Q96SZ6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDK5RAP1Q96SZ6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDK5RAP1Q96SZ6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CDK5RAP1Q96SZ6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP1Q96SZ6 KRT18P1-202ENST00000452408 1331 ntBASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 AP000974.1-201ENST00000623909 2387 ntBASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 AC073592.3-201ENST00000625118 1834 ntBASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 AC092329.2-201ENST00000598402 547 ntBASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms