Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 CICP6-201ENST00000457191 2729 ntBASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IPQ96QF0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 TERF1P2-201ENST00000583350 1212 ntBASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RAB3IPQ96QF0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 KRT8P45-201ENST00000414328 1447 ntBASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms