Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 AC006538.3-201ENST00000612495 578 ntBASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 AL773604.1-201ENST00000617417 272 ntBASIC18.75■□□□□ 0.59
LRRC3BQ96PB8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 AC112777.1-201ENST00000540175 1423 ntBASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 LINC00602-201ENST00000629776 2065 ntBASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 AL031284.1-201ENST00000419297 478 ntBASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 KRT18P67-201ENST00000432816 1264 ntBASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 AL049840.3-201ENST00000602669 611 ntBASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 AC008608.2-201ENST00000606089 416 ntBASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3BQ96PB8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 MIR574-201ENST00000385209 96 ntBASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 MTCL1P1-201ENST00000446207 792 ntBASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 AC064862.7-201ENST00000604520 867 ntBASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC3BQ96PB8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 AL138831.2-201ENST00000606564 490 ntBASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.72■□□□□ 0.59
LRRC3BQ96PB8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms