Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.85■□□□□ 0.77
LRCH3Q96II8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.85■□□□□ 0.77
LRCH3Q96II8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
LRCH3Q96II8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH3Q96II8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.85■□□□□ 0.77
LRCH3Q96II8 AC190387.1-201ENST00000551683 408 ntBASIC19.85■□□□□ 0.77
LRCH3Q96II8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.85■□□□□ 0.77
LRCH3Q96II8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
LRCH3Q96II8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
LRCH3Q96II8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.85■□□□□ 0.77
LRCH3Q96II8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.85■□□□□ 0.77
LRCH3Q96II8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH3Q96II8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH3Q96II8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH3Q96II8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LRCH3Q96II8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH3Q96II8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH3Q96II8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH3Q96II8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 AC020907.5-201ENST00000624372 1936 ntBASIC19.84■□□□□ 0.77
LRCH3Q96II8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRCH3Q96II8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRCH3Q96II8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRCH3Q96II8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRCH3Q96II8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRCH3Q96II8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.84■□□□□ 0.77
LRCH3Q96II8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 AC105339.3-201ENST00000560043 636 ntBASIC19.84■□□□□ 0.77
LRCH3Q96II8 MIR4745-201ENST00000577608 62 ntBASIC19.84■□□□□ 0.77
LRCH3Q96II8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 AC064836.3-201ENST00000607928 673 ntBASIC19.84■□□□□ 0.77
LRCH3Q96II8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 AL162377.1-201ENST00000618844 1793 ntBASIC19.84■□□□□ 0.77
LRCH3Q96II8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRCH3Q96II8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.84■□□□□ 0.77
LRCH3Q96II8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRCH3Q96II8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRCH3Q96II8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRCH3Q96II8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRCH3Q96II8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
LRCH3Q96II8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRCH3Q96II8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.83■□□□□ 0.77
LRCH3Q96II8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
LRCH3Q96II8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.83■□□□□ 0.77
LRCH3Q96II8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.83■□□□□ 0.77
LRCH3Q96II8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.83■□□□□ 0.77
LRCH3Q96II8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
LRCH3Q96II8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.83■□□□□ 0.76
LRCH3Q96II8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH3Q96II8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LRCH3Q96II8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.83■□□□□ 0.76
LRCH3Q96II8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH3Q96II8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH3Q96II8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LRCH3Q96II8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH3Q96II8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH3Q96II8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.82■□□□□ 0.76
LRCH3Q96II8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH3Q96II8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH3Q96II8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LRCH3Q96II8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LRCH3Q96II8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
LRCH3Q96II8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.82■□□□□ 0.76
LRCH3Q96II8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH3Q96II8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.82■□□□□ 0.76
LRCH3Q96II8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH3Q96II8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.82■□□□□ 0.76
LRCH3Q96II8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.82■□□□□ 0.76
LRCH3Q96II8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH3Q96II8 AL512408.1-201ENST00000569378 2000 ntBASIC19.82■□□□□ 0.76
LRCH3Q96II8 RNF165-205ENST00000588679 2904 ntBASIC19.82■□□□□ 0.76
LRCH3Q96II8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH3Q96II8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.82■□□□□ 0.76
LRCH3Q96II8 HLA-V-201ENST00000429037 534 ntBASIC19.82■□□□□ 0.76
LRCH3Q96II8 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.82■□□□□ 0.76
LRCH3Q96II8 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.82■□□□□ 0.76
LRCH3Q96II8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.82■□□□□ 0.76
LRCH3Q96II8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.82■□□□□ 0.76
LRCH3Q96II8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.82■□□□□ 0.76
LRCH3Q96II8 AC027612.4-201ENST00000605371 583 ntBASIC19.82■□□□□ 0.76
LRCH3Q96II8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.82■□□□□ 0.76
LRCH3Q96II8 KRT8P7-201ENST00000533003 1432 ntBASIC19.82■□□□□ 0.76
LRCH3Q96II8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH3Q96II8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LRCH3Q96II8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms