Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM11Q96F44 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM11Q96F44 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM11Q96F44 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM11Q96F44 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM11Q96F44 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
TRIM11Q96F44 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM11Q96F44 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM11Q96F44 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM11Q96F44 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM11Q96F44 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM11Q96F44 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRIM11Q96F44 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM11Q96F44 AC128688.1-201ENST00000487626 519 ntBASIC19.45■□□□□ 0.7
TRIM11Q96F44 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM11Q96F44 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM11Q96F44 MIR4497-201ENST00000583208 89 ntBASIC19.45■□□□□ 0.7
TRIM11Q96F44 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
TRIM11Q96F44 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM11Q96F44 AC112497.1-201ENST00000624824 639 ntBASIC19.45■□□□□ 0.7
TRIM11Q96F44 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM11Q96F44 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
TRIM11Q96F44 SDHAP2-201ENST00000455183 2001 ntBASIC19.45■□□□□ 0.7
TRIM11Q96F44 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM11Q96F44 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM11Q96F44 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM11Q96F44 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRIM11Q96F44 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM11Q96F44 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM11Q96F44 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM11Q96F44 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM11Q96F44 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM11Q96F44 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
TRIM11Q96F44 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
TRIM11Q96F44 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM11Q96F44 AC138028.4-201ENST00000564984 1845 ntBASIC19.44■□□□□ 0.7
TRIM11Q96F44 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM11Q96F44 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM11Q96F44 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
TRIM11Q96F44 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRIM11Q96F44 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.44■□□□□ 0.7
TRIM11Q96F44 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM11Q96F44 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
TRIM11Q96F44 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRIM11Q96F44 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM11Q96F44 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM11Q96F44 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM11Q96F44 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM11Q96F44 FLJ13224-201ENST00000313737 1514 ntBASIC19.44■□□□□ 0.7
TRIM11Q96F44 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM11Q96F44 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM11Q96F44 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM11Q96F44 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRIM11Q96F44 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM11Q96F44 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM11Q96F44 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM11Q96F44 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM11Q96F44 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM11Q96F44 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM11Q96F44 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM11Q96F44 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.43■□□□□ 0.7
TRIM11Q96F44 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
TRIM11Q96F44 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM11Q96F44 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRIM11Q96F44 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM11Q96F44 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM11Q96F44 AC104390.1-201ENST00000555663 520 ntBASIC19.43■□□□□ 0.7
TRIM11Q96F44 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM11Q96F44 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM11Q96F44 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRIM11Q96F44 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
TRIM11Q96F44 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM11Q96F44 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM11Q96F44 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM11Q96F44 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM11Q96F44 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM11Q96F44 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM11Q96F44 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM11Q96F44 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM11Q96F44 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM11Q96F44 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRIM11Q96F44 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRIM11Q96F44 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms